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Record W3005954983 · doi:10.1002/ajh.25754

Fixing the MRI R2‐iron calibration in liver

2020· letter· en· W3005954983 on OpenAlexaff
Eamon Doyle, Nilesh R. Ghugre, Thomas D. Coates, John C. Wood

Bibliographic record

VenueAmerican Journal of Hematology · 2020
Typeletter
Languageen
FieldMedicine
TopicHemoglobinopathies and Related Disorders
Canadian institutionsSunnybrook HospitalSunnybrook Health Science Centre
FundersNational Institute of Diabetes and Digestive and Kidney DiseasesNational Heart, Lung, and Blood InstituteNational Institutes of Health
KeywordsCalibrationMedicineRadiologyNuclear medicineMathematicsStatistics

Abstract

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Iron overload is surprisingly common, resulting from genetic abnormalities of iron regulation or as a result of chronic transfusion therapy. The magnetic resonance imaging (MRI) assessment of tissue iron stores has become the standard of care for monitoring iron chelation strategies.1 Note, MRI relaxometry using R2 or R2* are most commonly used. Only one MRI method, based upon a standardized protocol of spin-echo acquisitions and analysis (Ferriscan®, Resonance Health, Western Australia), has achieved regulatory approval in Europe and the United States.2, 3 The Ferriscan® method has been compared against 338 biopsies in two large cohorts, demonstrates good interstudy reproducibility, and has strong quality control practices. However, its cost remains a challenge for many institutions, making iron measurements by R2* acquisitions more financially attractive. Several large studies comparing liver iron concentration (LIC) by R2* and by Ferriscan® R2 have identified substantial bias between R2* and R2 LIC estimates.4-6 We postulated that the original Ferriscan R2 calibration overestimates LIC at high iron concentrations, exaggerating disagreements between the two techniques. We searched the literature for all studies comparing single spin echo R2 acquisitions and liver biopsy results, identifying three studies having 1052, 247, and 2333 liver biopsies, respectively. We used a publicly available program(www.arizona-software.ch/graphclick) to digitally capture the values of R2 for each LIC. We fit the data to the existing FDA-approved calibration2, 7 and compared the residual errors to two other calibration curves. The first was derived using a linear fit in log transformed LIC and R2 coordinates (so-called power-law fit). The second was derived from a spline fit to data generated from previously published8 computer model. This computer model generates "synthetic" R2-iron pairs over the entire physiological range of iron overload, using ideal mathematical approximations to the MRI imaging physics and quantitative statistics of tissue iron deposition.8 It has been used to successfully translate the R2 and R2* liver calibrations to 3T9 with high accuracy. Figure 1A demonstrates a scattergram of all available R2-LIC pairs for liver biopsy data and the FDA approved R2-iron calibration curve. At first blush, the FDA approved calibration appears to represent a good fit to the aggregate data. However, on closer inspection, a preponderance of points lie above the fit line at high LIC. Furthermore, the measurement uncertainty increases as iron burden and liver R2 increases. This is common in biological systems and indicates that calibration error should be calculated as a percentage, rather than an absolute LIC difference. Figure 1B demonstrates the relative difference between the biopsy and FDA-approved LIC plotted against the average of the two measurements. The 95% confidence intervals of the raw Bland Altman relationship are [−69% to 69%]. However, there is a significant downward linear drift (r2 = 0.097, P < .001) with FDA-approved calibration overestimating biopsy by 1.1% per mg/g; the root mean squared of this regression is 30.5%. The drift remained significant even if LIC values greater than 20 mg/g were suppressed. These data suggest that the FDA-approved R2-iron calibration used by Ferriscan® overestimates true liver iron concentration for LIC values exceeding 16.5 mg/g dry weight, with the differences growing geometrically. The calibration error is sufficient to completely explain the differences between LIC by R2* and Ferriscan® R2 described in previously studies.4-6 Importantly, any attempts to "calibrate" R2* or other MRI methods against Ferriscan® need to account for this bias. Several factors contribute to the bias in FDA-approved calibration. The original calibration study probably had insufficient patients (N = 104) to fully characterize a complicated, nonlinear relationship having four degrees of freedom (the power-law calibration has two degrees of freedom). Secondly, the initial patient pool did not have sufficient numbers of patients with severe iron overload. Thirdly, the original calibration was intentionally biased for accurate low iron behavior by including 32 subjects having normal liver iron concentration. It is challenging to find a single curve that perfectly describes very low and very high LIC values. The properties of normal liver structure dominate R2 values at low iron concentration while the impact of siderosomes dominate at high iron concentration.8 The power-law and simulations are optimized for LIC values greater than 5 mg/g while the FDA-calibration was optimized for excellent low iron performance; a piecewise approach may ultimately represent the optimal solution. Lastly, the data heteroscedasticity was not adequately controlled during the fitting and evaluation processes for the FDA-approved calibration, contributing to systematic bias; the power law calibration corrects for heteroscedasticity. Fortunately, the clinical impact of the observed calibration bias is manageable. Patients with LIC below 16.5 mg/g are being accurately risk stratified. Patients with LIC greater than 16.5 mg/g in their liver are universally at high risk and should be treated aggressively, regardless. Serial trends in LIC-R2 values may also lessen the impact of calibration bias.5 Both Ferriscan® and R2* LIC estimates and provide accurate estimates of chelator efficiency on an annual basis.5 Further, both Ferriscan® and liver R2* LIC estimates are more accurate than liver biopsy in tracking changes in total body iron concentration.10 However, hematologists should treat Ferriscan® predicted LIC values of more than 16.5 mg/g with appropriate caution and integrate the predicted LIC values with the patient's entire clinical picture to avoid over-reacting to large changes in predicted LIC. If more accurate LIC predictions are desired in highly loaded subjects, Ferriscan® R2 values can be converted to LIC values from equation (2) using a simple calculator. This work supported by the National Institutes of Health, Diabetes, Digestive and Kidney Diseases (1R01DK097115-01A1). Dr. Wood serves as a consultant to Apopharma, Biomedinformatics, Bluebirdbio, Celgene, Ionis Pharmaceuticals, Imago Biosciences, Silence Therapeutics, and World Care Clinical.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesResearch integrity
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.129
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.003
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.238
Teacher spread0.229 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations9
Published2020
Admission routes1
Has abstractyes

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