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Record W3006901343 · doi:10.1016/j.imu.2020.100305

Automatic classification of cognitively normal, mild cognitive impairment and Alzheimer's disease using structural MRI analysis

2020· article· en· W3006901343 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

fundA Canadian funder is recorded on the work.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueInformatics in Medicine Unlocked · 2020
Typearticle
Languageen
FieldMedicine
TopicDementia and Cognitive Impairment Research
Canadian institutionsnot available
FundersJohnson and Johnson Pharmaceutical Research and DevelopmentNational Institute of Biomedical Imaging and BioengineeringFujirebio EuropeNational Institute on AgingGenentechNational Institutes of HealthDoD Alzheimer's Disease Neuroimaging InitiativeH. Lundbeck A/SAlzheimer's Disease Neuroimaging InitiativeU.S. Department of DefenseGE HealthcareJanssen Alzheimer Immunotherapy Research And DevelopmentNorthern California Institute for Research and EducationCanadian Institutes of Health ResearchUniversity of Southern California
KeywordsDementiaCognitionNeuroimagingMagnetic resonance imagingAlzheimer's diseaseDiseaseCognitive impairmentReceiver operating characteristicPsychologyCohen's kappaAudiologyMedicinePathologyNeuroscienceInternal medicineRadiologyMachine learningComputer science

Abstract

fetched live from OpenAlex

Early detection of dementia for clinical diagnosis is challenging due to high subjectivity and individual variability in cognitive assessments, as well as the evaluation of protein biomarkers, which are mostly used for staging of Alzheimer's disease. Currently, although there is no effective treatment for Alzheimer's disease, early detection of dementia through magnetic resonance imaging analysis may assist in developing preventive measures to slow disease progression. In this paper, we developed an automated machine learning method for classifying cognitively normal aging, early mild cognitive impairment, late mild cognitive impairment, and Alzheimer's disease individuals. In this study, a total of 1167 whole-brain magnetic resonance imaging scans of individuals who are cognitively normal aging controls, early mild cognitive impairment, late mild cognitive impairment, and patients with probable Alzheimer's disease were obtained from the Alzheimer's Disease Neuroimaging Initiative database. We measured regional cortical thickness of both left and right hemispheres (68 features) using FreeSurfer analysis for each individual, and utilized these 68 features for model building. We further tested scans of individuals to classify them into four groups using various machine learning methods. We found that the cortical thickness feature, based on the non-linear support vector machine classifier with radial basis function, showed the highest specificity (0.77), sensitivity (0.75), F-score (0.72), Matthew's correlation coefficient (0.71), Kappa-statistic (0.69), receiver operating characteristic area under the curve (0.76), and an overall accuracy of 75% in classifying all four groups using ten-fold cross-validation with respect to the clinical scale. In addition, we also predicted the features for classifying all four groups using the support vector regression algorithm. The non-linear support vector machine using a radial basis function kernel showed good accuracy in classifying different stages of dementia. Thus, machine learning methods are useful for radiological imaging tasks such as diagnosis, prognosis, risk assessment, and early detection.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.402
Threshold uncertainty score0.812

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.059
GPT teacher head0.362
Teacher spread0.304 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it