MétaCan
Menu
← Back to cohort
Record W3008818433 · doi:10.1093/jcag/gwz047.205

A206 SUSCEPTIBILITY OF HNF4AΔIEC MICE TO SALMONELLA INFECTIONS

2020· article· en· W3008818433 on OpenAlexaff
D Pupo Gómez, V Reyes-Nicolas, G. Marrero, Nathalie Perreault, Alfredo Menéndez, F Boudreau

Bibliographic record

VenueJournal of the Canadian Association of Gastroenterology · 2020
Typearticle
Languageen
FieldMedicine
TopicHelicobacter pylori-related gastroenterology studies
Canadian institutionsUniversité de Sherbrooke
Fundersnot available
KeywordsIntestinal epitheliumImmune systemEpitheliumInflammatory bowel diseaseCecumBiologySpleenImmunologyMicrobiologyMedicineDiseasePathologyInternal medicineGenetics

Abstract

fetched live from OpenAlex

Abstract Background Inflammatory bowel diseases (IBD) are a group of chronic disorders that affect more than 233 000 Canadians and for which there is not yet an effective treatment. In addition, IBD is a multifactorial disease depending on genetic, immune and environmental dysregulations. The gastrointestinal epithelium plays an important role as a barrier that protects against antigens and bacterial products that are in the lumen. It is well recognized that a defect in the integrity of the barrier and its functions may be involved in the development of these diseases. On the other hand, our laboratory has shown that the conditional deletion of HNF4alpha nuclear receptor (Hnf4a) in the intestinal epithelium of mice can lead to the development of chronic inflammation of the intestine. However, the impact of the loss of this transcriptional factor on the epithelial barrier is still controversial. Aims To evaluate the impact of Hnf4a deletion on the epithelial barrier during bacterial infections. Methods We used a tamoxifen-inducible Cre-loxP system to delete the Hnf4a gene in the intestinal epithelium of 2-month-old mice, that were then infected with an attenuated strain of Salmonella typhimurium (SB1003) during 4 days. S. typhimurium loads were determined in cecum and colon content, and in liver, spleen tissues by plating homogenates on LB agar supplemented with streptomycin. Also, histological examinations and gene expression of selected targets were assessed between mutant (Hnf4aΔIEC) and control mice. Results The tamoxifen-inducible Cre-loxP system was able to delete intestinal Hnf4a gene expression with almost 100% of efficacy. Analysis by qPCR showed that the infection caused significant changes on the response of different infection responsive components (Relmβ, Muc2 and IL-33) in mutant mice. In addition, morphological analyses revealed an increase in the infiltration of immune cells and the number of goblets cells, indicative of an increase in the susceptibility to Salmonella typhimurium (SB1003) infection of the mutant mice. Conclusions Altogether, our results suggest that Hnf4a could be involved or play an important role as a modulator of the intestinal epithelial barrier function during Salmonella typhimurium (SB1003) infection. Therefore, understanding the mechanisms involved in this process could allow the development of better therapies for IBD. Funding Agencies CIHR

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.022

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0070.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.244
Teacher spread0.229 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

Explore more

Same venueJournal of the Canadian Association of Gastroenterology→Same topicHelicobacter pylori-related gastroenterology studies→French-language works237,207→