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Record W3013935260 · doi:10.1117/12.2567580

The Foveal Avascular Zone Image Database (FAZID)

2020· article· en· W3013935260 on OpenAlexaff
Arpit Agarwal, Rajiv Raman, Vasudevan Lakshminarayanan

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldMedicine
TopicRetinal Imaging and Analysis
Canadian institutionsUniversity of Waterloo
Fundersnot available
KeywordsFovealArtificial intelligenceComputer scienceFoveal avascular zoneGround truthSegmentationComputer visionFundus (uterus)Image segmentationOptical coherence tomographyRetinalMedicineOphthalmology

Abstract

fetched live from OpenAlex

The Foveal Avascular Zone (FAZ) is of clinical importance since the vascular arrangement around the fovea changes with disease and refractive state of the eye. Therefore, it is important to segment and quantify the FAZ accurately. Studies done to date have achieved reasonable segmentation but there is a need for considerable improvement. In order to test and validate newly developed automated segmentation algorithms, we have created a public dataset of these retinal fundus images. The 304 images in the dataset are classified into: diabetic (107), myopic (109) and normal (88) eyes. The images were classified by a clinical expert and include clinical grading of diabetic retinopathy and myopia. The images are of dimensions 420 x 420 pixels (6mm x 6mm of retina). Both clear and manually segmented by a clinical expert (ground truth) images are available (608 total images). In these images, the FAZ is the green region marked in manually segmented image. The images can be used to test newly developed techniques and the manual segmentation images can be used as a ground truth for making performance comparisons and validation. It should also be noted there are only a few studies using supervised learning to segment the FAZ and this dataset will potentially be useful for machine learning training and validation. The image database, The Foveal Avascular Zone Image Database (FAZID) dataset can be accessed from the ICPSR website at the University of Michigan (https://doi.org/10.3886/E117543V2).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.011
Threshold uncertainty score0.027

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0050.002
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0020.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0080.008

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.275
Teacher spread0.258 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations14
Published2020
Admission routes1
Has abstractyes

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