MétaCan
Menu
Back to cohort
Record W3014483120 · doi:10.3389/fmars.2020.00153

Horseshoe Crab Aquaculture as a Sustainable Endotoxin Testing Source

2020· article· en· W3014483120 on OpenAlexaff
Rachel Tinker-Kulberg, Kristen Dellinger, Terry E. Brady, Lee Robertson, Jerrold H. Levy, Sarah K. Abood, Frank M. LaDuca, Christopher L. Kepley, Anthony Dellinger

Bibliographic record

VenueFrontiers in Marine Science · 2020
Typearticle
Languageen
FieldEnvironmental Science
TopicEnvironmental Toxicology and Ecotoxicology
Canadian institutionsUniversity of Guelph
FundersGoddard Space Flight CenterGeorgia Sea Grant, University of GeorgiaSmall Business Innovation ResearchNorth Carolina Sea Grant, North Carolina State UniversityNational Science Foundation
KeywordsHorseshoe crabAquacultureFisheryEnvironmental scienceFish <Actinopterygii>BiologyEcology

Abstract

fetched live from OpenAlex

Horseshoe crab (HSC) hemolymph is the source of Limulus amebocyte lysate (LAL), a critical component in sterility testing that ensures drug and medical device safety for millions of patients every year. Wild HSC populations have been declining as a result of use as whelk and eel bait, and largely due to capture and bleeding for hemolymph, primarily while spawning, thus posing significant biomedical supply and species viability risks. We investigated aquaculture as an alternative to current practices as a means to foster conservation by establishing a sustainable endotoxin testing resource. We found HSC aquaculture to be practicable based on routine hemolymph harvesting, batch uniformity, and LAL quality, while safeguarding animal wellbeing. Achieving sustainable LAL production could satisfy industry needs for several years with a fraction of one year’s current capture with low-impact, year-round harvesting of a finite cohort. Sustainable supplies of LAL could also be adapted to address daunting trends in septicemia and antimicrobial resistance. LAL is uniquely sensitive and specific for gram-negative bacteria, which represent 70-80% of pathogens typically attributed to sepsis. Early diagnosis of bacterial infection and timely antibiotic therapy can reduce patient mortality. However, erratic results associated with interfering substances plagued efforts to adapt LAL for clinical use in the past. Our efforts to develop new methods have yielded a promising LAL screening technique to detect a gram-negative bacteria and endotoxins in human blood.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.002
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.212
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations43
Published2020
Admission routes1
Has abstractyes

Explore more

Same venueFrontiers in Marine ScienceSame topicEnvironmental Toxicology and EcotoxicologyFrench-language works237,207