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Record W3015949473 · doi:10.1096/fasebj.21.5.a45-c

Control Of Translation From The mRNA 3′ End

2007· article· en· W3015949473 on OpenAlexaff
Nahum Sonenberg

Bibliographic record

VenueThe FASEB Journal · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRNA Research and Splicing
Canadian institutionsMcGill UniversityWilliam Osler Health System
Fundersnot available
KeywordsEIF4GPoly(A)-binding proteinEIF4EeIF4AMessenger RNACell biologyEukaryotic translationTranslation (biology)BiologyChemistryBiochemistryGene

Abstract

fetched live from OpenAlex

The eukaryotic mRNA 3′ polyA tail acts synergistically with the 5' cap structure to enhance translation. This mechanism is effected by a bridging complex, composed of the poly (A) binding protein (PABP), eIF4G, and the cap‐binding protein, eIF4E, which brings about mRNA circularization. The bridging between the mRNA 5' and 3' ends is regulated by several different mechanisms. We have discovered proteins that bind to PABP, termed Paips ( PA BP‐ i nteracting p roteins), which control translation initiation. Paip1 stimulates translation through its simultaneous interactions with PABP, eIF4A and eIF3, while Paip2 inhibits translation by dislodging PABP from the polyA tail and by competing with eIF4G for binding to PABP. The structural basis for the function of the Paips will be discussed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.269
Teacher spread0.254 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2007
Admission routes1
Has abstractyes

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