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Mitochondrial Protein Hyperacetylation in Rodents with Doxorubicin‐Induced Cardiac Dysfunction

2020· article· en· W3016500891 on OpenAlexaff
Mateusz M. Tomczyk, Kyle G. Cheung, Bo Xiang, Prasoon Agarwal, Stephanie M. Kereliuk, John A. Wilkins, Vernon W. Dolinsky

Bibliographic record

VenueThe FASEB Journal · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMitochondrial Function and Pathology
Canadian institutionsUniversity of Manitoba
Fundersnot available
KeywordsCardiolipinSOD2SIRT3Oxidative stressCardiac function curveChemistryMitochondrionAcetylationPharmacologyEndocrinologyInternal medicineBiologyBiochemistryMedicinePhospholipidSuperoxide dismutaseGene

Abstract

fetched live from OpenAlex

Objective Doxorubicin (DOX) is an effective chemotherapeutic but has dose‐dependent cardiotoxic effects that limits its use in pediatric patients. Previous studies in our lab showed that DOX decreases expression of the mitochondrial lysine deacetylase SIRT3 and mitochondrial phospholipid cardiolipin (CL) in the mouse heart. We hypothesize that DOX impairs cardiac function as a consequence of reduced SIRT3 expression resulting in increased acetylation of mitochondrial proteins involved in cardiac energy and oxidative stress homeostasis. Methods C57BL6 mice were given DOX (8.0mg/kg body weight) or saline control injections for 4 weeks. Transthoracic echocardiography was performed on all mice (n=10 per group) and parameters of cardiac structure, systolic and diastolic function were measured. Cardiac mitochondria were isolated from saline and DOX mice and an anti‐acetylated lysine antibody was used to enrich for tryptic digested peptides containing acetylated lysines followed by mass spectroscopy analysis (n=6). Results DOX treated mice exhibit decreased left ventricular posterior wall thickness (P<0.05), increased intraventricular relaxation time and reduced ejection fraction, compared to controls (P<0.05). Quantitative PCR of cardiolipin biosynthesis genes revealed Ptpmt1 and Crls1 gene expression was reduced by half with DOX compared to controls (p<0.01). In DOX treated mice, we observed an enrichment of cardiac mitochondrial acetylated peptides of proteins involved in metabolic, CL remodelling processes and oxidative stress resistance (eg. ATP5F1A, TFEα, SOD2, P<0.05, >2‐fold increase). MitoSOX staining of human induced pluripotent stem cell derived cardiomyocytes revealed an increase (2.5‐fold, p<0.001) in reactive oxygen species production with DOX treatment which was attenuated with adenoviral SIRT3 overexpression. Conclusion Alterations to the mitochondrial acetylome may be responsible for DOX‐induced cardiac dysfunction in mice. SIRT3 overexpression attenuates production of reactive oxygen species in human derived cardiomyocytes and SIRT3 may prevent cardiotoxic effects of DOX.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.228
Teacher spread0.211 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2020
Admission routes1
Has abstractyes

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