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Record W3025364589 · doi:10.1149/ma2020-01271863mtgabs

Optimization of Fc-Thiolate SAMs for Electrochemically Mediated Bacterial Biosensors

2020· article· en· W3025364589 on OpenAlexaff
Raunak Singh, Armando J. Marenco, Margaret Renaud‐Young, Viola Birss

Bibliographic record

VenueECS Meeting Abstracts · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAdvanced biosensing and bioanalysis techniques
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsBiosensorChemistryNanotechnologyMaterials scienceBiophysicsBiology

Abstract

fetched live from OpenAlex

Alkanethiol Self-Assembled Monolayers (SAMs), typically deposited on Au substrates, have been commonly utilized to immobilize receptor biomolecules in the construction of a variety of biosensors, such as the detection of glucose oxidase by the immobilization of calixarenes thiols 1 . The appeal of using SAMs derives from their ease of fabrication and component flexibility, allowing for more than one alkanethiol to be deposited in a single monolayer. This results in the formation of SAMs in which each thiol component adds a different property or role, thus introducing versatility to the construction and operation of resulting sensors 2 . In our recent work, alkanethiol SAMs, composed of three different thiol molecules, were constructed for use as an electrochemical Toll-Like Receptor 4 (TLR4)-based sensor that can detect Gram-negative bacteria. TLRs are a family of immunoproteins in the innate immune system, which are able to detect a broad category of pathogens, rather than specific targets, as is the case with the adaptive system (e.g., antibodies). In our published work 3 , SAMs consisted of a carboxylic acid terminated thiol that allowed for the conversion to a nitrilotriacetic (NTA) group. This moiety could then chelate a Ni 2+ cation, followed by attachment of the TLR4 immunoprotein via its His-tag. The second thiol in the SAM contained a terminal ferrocene (Fc) group, where the Fc group was bound to the C11 chain via an amide group. Here, the Fc group serves as a mediator for charge transfer between ferrocyanide in solution and the Au substrate, resulting in relatively high current signals, thus making the sensor potentially field deployable. The third thiol in these SAMs was a hydroxy-terminated thiol, added as a diluent between the immobilized TLR4 receptors. SAMs were prepared by co-deposition on sputter Au on glass. Electrochemical testing involved cyclic voltammetry (CV) studies in pH 7 buffer solution in order to determine the amount of Fc-thiol present, as well as CV and electrochemical impedance spectroscopy (EIS) studies in ferrocyanide solutions to examine its redox-mediation response and to obtain a measure of the charge transfer rate. In the presence of lysed bacteria, the immobilized TLR4 dimerizes, which blocks electrochemical mediation between ferrocyanide and the surface bound Fc. This results in an increase in R CT which is our biosensor signal. However, a key problem with these sensors is that their R CT increased with electrochemical testing in the absence of lysed bacteria, producing signal drift. Thus, in the present work, the reasons for sensor signal drift and methods to overcome it were explored. It was found in recent work that the drift of the full TLR4 sensor was correlated with the loss in the Fc redox signal, although it was not clear if underlying SAM was at the root of the problem. If so, then it was necessary to determine if the loss in the Fc redox activity was caused by the physical loss of the Fc thiol from the Au surface or deactivation of the Fc surface complex and/or its electrochemistry. To determine which of these options was responsible for signal drift, the relative % v/v fraction of the three thiols was varied, and in later work, based on chemical considerations, the Fc molecule containing an amide group was replaced with a C11 chain bonded directly to the Fc. It was found that this latter strategy led to a very stable SAM, showing negligible drift in the Fc CV charges and in the R CT values in ferrocyanide solutions, with or without the TLR4 receptor attached on the outer surface of the SAM. This presentation will focus on presenting the electrochemistry of the various binary and ternary thiol SAMs investigated in this work and examining the Fc CV peak charges, potential, and kinetics, as well as the double layer capacitance, to better understand how and why the Fc redox response was stabilized. This is important because this correlates directly with the stability of the TLR4/Gram-negative bacteria sensor, as will be demonstrated for a TLR2 biosensor tested against Gram-positive bacteria cell wall ligands. References 1. Demirkol, D. O., Yildiz, H. B., Sayin, S. & Yilmaz, M. Enzyme immobilization in biosensor constructions: Self-assembled monolayers of calixarenes containing thiols. RSC Adv. 4 , 19900–19907 (2014). 2. Ulman, A. Formation and structure of self-assembled monolayers. Chem. Rev. 96 , 1533–1554 (1996). 3. Mayall, R. M. et al. Enhanced Signal Amplification in a Toll-like Receptor-4 Biosensor Utilizing Ferrocene-Terminated Mixed Monolayers. ACS Sensors 4 , 143–151 (2018).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.052
Threshold uncertainty score0.606

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.248
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2020
Admission routes1
Has abstractyes

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