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Record W3035529565 · doi:10.1094/pdis-03-20-0507-pdn

First Report of Damping-Off on <i>Cucumis melo</i> Caused by <i>Pythium irregulare</i> in South Korea

2020· article· en· W3035529565 on OpenAlexaboutno aff
Mi-Jeong Park, Chang–Gi Back, J. Park

Bibliographic record

VenuePlant Disease · 2020
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Pathogens and Resistance
Canadian institutionsnot available
FundersRural Development Administration
KeywordsBiologyCucumisDamping offPythiumBotanyHorticultureBiological pest control

Abstract

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HomePlant DiseaseVol. 104, No. 11First Report of Damping-Off on Cucumis melo Caused by Pythium irregulare in South Korea PreviousNext DISEASE NOTES OPENOpen Access licenseFirst Report of Damping-Off on Cucumis melo Caused by Pythium irregulare in South KoreaMi-Jeong Park, Chang-Gi Back, and Jong-Han ParkMi-Jeong Park†Corresponding author: M. J. Park; E-mail Address: mijpark@korea.krhttp://orcid.org/0000-0001-7452-3478Horticultural and Herbal Crop Environment Division, National Institute of Horticultural and Herbal Science, Rural Development Administration, Wanju 55365, Republic of Korea, Chang-Gi BackHorticultural and Herbal Crop Environment Division, National Institute of Horticultural and Herbal Science, Rural Development Administration, Wanju 55365, Republic of Korea, and Jong-Han ParkHorticultural and Herbal Crop Environment Division, National Institute of Horticultural and Herbal Science, Rural Development Administration, Wanju 55365, Republic of Korea AffiliationsAuthors and Affiliations Mi-Jeong Park † Chang-Gi Back Jong-Han Park Horticultural and Herbal Crop Environment Division, National Institute of Horticultural and Herbal Science, Rural Development Administration, Wanju 55365, Republic of Korea Published Online:17 Sep 2020https://doi.org/10.1094/PDIS-03-20-0507-PDNAboutSectionsView articlePDFPDF PlusSupplemental ToolsAdd to favoritesDownload CitationsTrack Citations ShareShare onFacebookTwitterLinked InRedditEmailWechat View articleMuskmelons (Cucumis melo L.) are among the most popular cucurbits worldwide and are cultivated in Korea for their sweet and juicy taste. In April 2018, wilting and damping-off symptoms were observed in melon seedlings planted in a greenhouse located in Jeonju, South Korea (35°52′37.7″N, 127°05′10.6″E). Seven days after planting, approximately 10% of the 10,000 seedlings at the two-true-leaf stage were wilted, and brown, water-soaked lesions were observed on stems and roots at or below soil level in wet soil. Plants in advanced stages of this disease wilted completely, damped off, and died. Sections (10 mm2) from 10 diseased stems were surface disinfected with 1% sodium hypochlorite for 30 s, followed by 70% ethanol for 30 s, and rinsed in sterilized distilled water for 1 min. Each section was placed on water agar medium. A small block of agar containing a single hyphal tip of the fungus was taken from the margin of the colony on water agar under the microscope and transferred to new medium. Pure fungal cultures with same growth pattern were obtained from all the sections. A representative culture sample was deposited in the Korean Agricultural Culture Collection (accession no. KACC 48924). On potato dextrose agar (PDA), colonies were white and cottony with a rosette pattern. The isolate grew between 5 and 35°C, with an optimum range of 25 to 30°C, and fully colonized a PDA plate in 3 days. The main hyphae were 2 to 5 μm in width. Hyphal swellings were globose to subglobose, or irregular, intercalary, or terminal, and 10 to 20 μm in diameter. Oogonia were globose, terminal, or intercalary, and 15 to 20 μm in diameter. Antheridia were one to two per oogonium and were mostly monoclinous, sometimes diclinous. Oospores were globose, mostly aplerotic, sometimes plerotic, and 15 to 19 μm in diameter. On the basis of this morphological data, the isolate was tentatively identified as Pythium irregulare Buisman (Van der Plaats-Niterink 1981). For molecular identification of the isolate, genomic DNA was extracted from the mycelial mats, and the ITS rDNA and cox2 gene regions were amplified using primers ITS1/ITS4 (White et al. 1990) and Cox2-F/Cox2-RC4 (Choi et al. 2015), respectively. Sequences from this isolate have been submitted to GenBank with accession numbers MN955406 and MN953048. NCBI BLAST searches showed 99% identity to P. irregulare CBS 250.28 (ex-neotype culture) in both ITS rDNA (AY598702, 944/946 base pairs) and cox2 gene (GU071760, 552/556 base pairs) sequences. A pathogenicity test of the isolate was performed on 4-week-old muskmelon seedlings (Earl's Talent cultivar). The underground portions of each plant were inoculated with hyphal suspensions of the isolate, which were poured into each pot. Plants treated with sterile water served as controls. After inoculation, plants were maintained in a glass greenhouse at 25°C. The soil in each pot was continuously kept moist. Five days after inoculation, inoculated seedlings showed characteristic symptoms of damping-off disease. Infected seedlings wilted, and water-soaked lesions appeared on the lower stems, near the soil line. The symptoms observed in this pathogenicity test were similar to those observed in the greenhouse. Control plants displayed no symptoms. The pathogenicity test was repeated twice. The same organism was reisolated from inoculated plants, confirming Koch's postulates. P. irregulare is known to have a broad host range, including cucurbits (Farr and Rossman 2020). Occurrences of disease caused by P. irregulare on melons have been previously recorded in regions of North America, including the United States and Canada. To our knowledge, this is the first report of damping-off caused by P. irregulare on melons in Korea. The pathogen presents a potential threat to South Korean melon seedling production.The author(s) declare no conflict of interest.References:Choi, Y. J., et al. 2015. Mol. Ecol. Resour. 15:1275. https://doi.org/10.1111/1755-0998.12398 Crossref, ISI, Google ScholarFarr, D. F., and Rossman, A. Y. 2020. Fungal Databases, Syst. Mycol. Microbiol. Lab., ARS, USDA. Retrieved January 20, 2020, from https://nt.ars-grin.gov/fungaldatabases/. Google ScholarVan der Plaats-Niterink, A. J. 1981. Stud. Mycol. 21:1. Google ScholarWhite, T. J., et al. 1990. Page 315 in: PCR Protocols: A Guide to Methods and Applications. Academic Press, San Diego, CA. Crossref, Google ScholarThe author(s) declare no conflict of interest.Funding: Funding was provided by the Rural Development Administration (grant no. PJ01435701).DetailsFiguresLiterature CitedRelated Vol. 104, No. 11 November 2020SubscribeISSN:0191-2917e-ISSN:1943-7692 DownloadCaptionPlants of Echinacea purpurea affected by Verticillium dahliae (A. Garibaldi et al.). Photo credit: M. L. Gullino. Spinach plant infected with Stemphylium leaf spot (K. A. Spawton et al.). Photo credit: M. T. McGrath. Metrics Downloaded 352 times Article History Issue Date: 30 Oct 2020Published: 17 Sep 2020First Look: 11 Jun 2020Accepted: 8 Jun 2020 Pages: 3060-3060 Information© 2020 The American Phytopathological SocietyFundingRural Development AdministrationGrant/Award Number: PJ01435701KeywordsCucumis melodamping-offmuskmelonPythium irregulareThe author(s) declare no conflict of interest.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.648
Threshold uncertainty score0.246

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.188
Teacher spread0.171 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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