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Record W3039970306 · doi:10.24908/iqurcp.14029

Identifying the repellent genes in Cannabis (C. sativa) through CRISPR screening. The hidden use of Marijuana

2020· article· en· W3039970306 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueInquiry Queen s Undergraduate Research Conference Proceedings · 2020
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicInsect Pest Control Strategies
Canadian institutionsnot available
Fundersnot available
KeywordsCannabis sativaMeloidogyne incognitaTerra incognitaBiologyCannabisGenePesticideBiotechnologyToxicologyBotanyNematodeAgronomyGeneticsMedicineEcology

Abstract

fetched live from OpenAlex

Chemical pesticides have caused numerous deaths of people, animals, and plants. As a result, alternative pesticides which are health beneficial and ecological are needed. Cannabis sativa,​ known for its psychoactive effects, can be the solution to this problem. It has excellent repellent characteristics as seen through its use as a companion plant, as well as in-vitro studies. However it has its drawbacks due its controversial nature and lack of research. To solve this problem, our paper aims to locate the non-vital genes in ​C.sativa that cause its repellent effects (R-genes) through CRISPR screening. To optimally identify the R-genes, the random knocked out genes of ​C.sativa were compared to the percentage of alive root-knot nematodes (​M.incognita​) in the plant’s soil. In our experiment, four plants were established per sample: Plant A which is a normal ​Cannabis sativa​, Plant B which is a normal ​Cannabis sativa being infected by ​M.incognita,​ Plant C which is a genetically modified ​Cannabis sativa​, and Plant D which is the same as Plant C except it is being infected by ​M.incognita.​ Then the percentage of alive nematodes will be compared in Plant B and D to identify the R genes. The discovery of R-genes is important as it can be used to discover a new class of repellent molecules. They can also be inserted into crops or household plants, giving them ​Cannabis sativa​’s repellent effects, and benefiting agricultural and health fields.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.403
Threshold uncertainty score0.988

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.002
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.283
GPT teacher head0.360
Teacher spread0.077 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it