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Record W3040730233 · doi:10.1038/s41398-020-00881-8

Mutations in sphingolipid metabolism genes are associated with ADHD

2020· article· en· W3040730233 on OpenAlexaff
Marcela Henríquez‐Henríquez, Maria T. Acosta, Ariel F. Martinez, Jorge I. Vélez, Francisco Lopera, David Pineda, Juan David Palacio, Teresa Quiroga, Tilla S. Worgall, Richard J. Deckelbaum, Claudio A. Mastronardi, Brooke S. G. Molina, Benedetto Vitiello, Joanne B. Severe, Peter S. Jensen, L. Eugene Arnold, Kimberly Hoagwood, John E. Richters, Donald Vereen, Stephen P. Hinshaw, Glen R. Elliott, Karen C. Wells, Jeffery N. Epstein, Desiree W. Murray, C. Keith Conners, John S. March, James M. Swanson, Timothy Wigal, Dennis P. Cantwell, Howard Abikoff, Lily Hechtman, Laurence L. Greenhill, Jeffrey H. Newcorn, Betsy Hoza, William E. Pelham, Robert D. Gibbons, Sue M. Marcus, Kwan Hur, Helena C. Kraemer, Thomas Hanley, Karen Stern, Mauricio Arcos‐Burgos, Maximilian Muenke

Bibliographic record

VenueTranslational Psychiatry · 2020
Typearticle
Languageen
FieldMedicine
TopicAttention Deficit Hyperactivity Disorder
Canadian institutionsMcGill UniversityMontreal Children's Hospital
FundersNHLBI Division of Intramural ResearchNational Human Genome Research InstituteNational Institute on Drug AbuseU.S. Department of Health and Human ServicesNational Institutes of HealthNational Institute of Mental HealthComisión Nacional de Investigación Científica y Tecnológica
KeywordsSphingolipidGeneGeneticsSchizophrenia (object-oriented programming)MutationBiologyMedicinePharmacologyBioinformaticsPsychiatry

Abstract

fetched live from OpenAlex

Attention deficit hyperactivity disorder (ADHD) is the most prevalent neurodevelopmental disorder in children, with genetic factors accounting for 75-80% of the phenotypic variance. Recent studies have suggested that ADHD patients might present with atypical central myelination that can persist into adulthood. Given the essential role of sphingolipids in myelin formation and maintenance, we explored genetic variation in sphingolipid metabolism genes for association with ADHD risk. Whole-exome genotyping was performed in three independent cohorts from disparate regions of the world, for a total of 1520 genotyped subjects. Cohort 1 (MTA (Multimodal Treatment study of children with ADHD) sample, 371 subjects) was analyzed as the discovery cohort, while cohorts 2 (Paisa sample, 298 subjects) and 3 (US sample, 851 subjects) were used for replication. A set of 58 genes was manually curated based on their roles in sphingolipid metabolism. A targeted exploration for association between ADHD and 137 markers encoding for common and rare potentially functional allelic variants in this set of genes was performed in the screening cohort. Single- and multi-locus additive, dominant and recessive linear mixed-effect models were used. During discovery, we found statistically significant associations between ADHD and variants in eight genes (GALC, CERS6, SMPD1, SMPDL3B, CERS2, FADS3, ELOVL5, and CERK). Successful local replication for associations with variants in GALC, SMPD1, and CERS6 was demonstrated in both replication cohorts. Variants rs35785620, rs143078230, rs398607, and rs1805078, associated with ADHD in the discovery or replication cohorts, correspond to missense mutations with predicted deleterious effects. Expression quantitative trait loci analysis revealed an association between rs398607 and increased GALC expression in the cerebellum.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.064
Threshold uncertainty score0.524

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.053
GPT teacher head0.311
Teacher spread0.258 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations24
Published2020
Admission routes1
Has abstractyes

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