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Record W3048504327 · doi:10.1002/aic.17021

Using prior parameter knowledge in <scp>model‐based</scp> design of experiments for pharmaceutical production

2020· article· en· W3048504327 on OpenAlexaff
Ali Shahmohammadi, Kimberley B. McAuley

Bibliographic record

VenueAIChE Journal · 2020
Typearticle
Languageen
FieldDecision Sciences
TopicOptimal Experimental Design Methods
Canadian institutionsQueen's University
FundersEli Lilly and Company
KeywordsFisher informationComputationComputer scienceBayesian probabilitySelection (genetic algorithm)Bayesian information criterionInvertible matrixPrior informationSequential analysisDesign of experimentsAlgorithmProcess (computing)Mathematical optimizationModel selectionMatrix (chemical analysis)MathematicsMachine learningArtificial intelligenceStatistics

Abstract

fetched live from OpenAlex

Abstract Sequential model‐based design of experiments (MBDoE) uses information from previous experiments to select new experimental conditions. Computation of MBDoE objective functions can be impossible due to a noninvertible Fisher information matrix (FIM). Previously, we evaluated a leave‐out (LO) approach that designed experiments by removing problematic model parameters from the design process. Unfortunately, the LO approach can be computationally expensive due to its iterative nature. In this study, we propose a simplified Bayesian approach that makes the FIM invertible by accounting for prior parameter information. We compare the proposed simplified Bayesian approach to the LO approach for sequential A‐optimal design. Results from a pharmaceutical case study show that the proposed approach is superior, on average, for design of experiments. We suggest that simplified Bayesian MBDoE should be combined with a subset‐selection‐based approach for parameter estimation. This combined methodology gave the best results on average for the case study.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.030
metaresearch head score (Gemma)0.046
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.030
Threshold uncertainty score0.160

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0300.046
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.002
Open science0.0010.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.640
GPT teacher head0.559
Teacher spread0.081 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations33
Published2020
Admission routes1
Has abstractyes

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