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Susceptibility of non-native invasive plants to novel pathogen attack -- do plant traits matter?

2020· preprint· en· W3048825470 on OpenAlexaff
Catherine Fahey, Akihiro Koyama, Pedro M. Antunes

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsAlgoma University
Fundersnot available
KeywordsBiologyPathogenInvasive speciesBotanyGenetics

Abstract

fetched live from OpenAlex

1. Invasive plants are considered major threats to biodiversity globally; however, our understanding of the long-term dynamics of invasion remains limited. 2. Over time, invasive plants can accumulate pathogens capable of causing population declines because invaders have a greater chance of encountering such pathogens as they spread and native pathogens adapt to use invasive plants as a resource over time. However, reports typically focus on individual species and ecologists lack a synthesis approach capable of predicting pathogen susceptibility in plant invaders. 3. Pathogen resistance and tolerance are tightly coupled to plant traits, which we suggest can provide a framework for understanding and predicting novel pathogen accumulation. 4. We reviewed the literature to synthesize plant traits associated with pathogen susceptibility and to determine the prevalence of novel pathogen accumulation on invasive plants. We then used these data and applied a multivariate model to associate plant traits with pathogen effects to predict pathogen susceptibility of invasive plants. Finally, we provide directions for future research. 5. Considering the emergence of trait-based approaches, comprehensive databases, and new data on individual invasions, advances in our understanding of invasive plant-pathogen interactions can lead to breakthroughs both at fundamental and management decision-making levels.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.032
GPT teacher head0.273
Teacher spread0.241 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2020
Admission routes1
Has abstractyes

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