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An Attention-Guided Deep Neural Network for Annotating Abnormalities in Chest X-ray Images: Visualization of Network Decision Basis

2020· article· en· W3082170068 on OpenAlexaff
Khadijeh Saednia, Ali Jalalifar, Shahin Ebrahimi, Ali Sadeghi‐Naini

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldMedicine
TopicCOVID-19 diagnosis using AI
Canadian institutionsYork University
Fundersnot available
KeywordsComputer scienceVisualizationArtificial neural networkBasis (linear algebra)Artificial intelligenceComputer vision

Abstract

fetched live from OpenAlex

Despite the potential of deep convolutional neural networks for classification of thorax diseases from chest X-ray images, this task is still challenging as it is categorized as a weakly supervised learning problem, and deep neural networks in general suffer from a lack of interpretability. In this paper, a deep convolutional neural network framework with recurrent attention mechanism was investigated to annotate abnormalities in chest X-ray images. A modified MobileNet architecture was adapted in the framework for classification and the prediction difference analysis method was utilized to visualize the basis of network's decision on each image. A long short-term memory network was utilized as the attention model to focus on relevant regions of each image for classification. The framework was evaluated on NIH chest X-ray dataset. The attention-guided model versus the model with no attention mechanism could annotate the images in an independent test set with an F1-score of 0.58 versus 0.46, and an AUC of 0.94 versus 0.73. The obtained results implied that the proposed attention-guided model could outperform the other methods investigated previously for annotating the same dataset.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.327
Threshold uncertainty score0.747

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.046
GPT teacher head0.355
Teacher spread0.309 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2020
Admission routes1
Has abstractyes

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