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Validation of Diffeomorphic Registration on Cine Cardiac MR via Direct Frame-to-Frame Comparison with HARP Tracking on Tagged MR

2020· article· en· W3082757009 on OpenAlexaff
Ahmed Ahmed, Deepa Krishnaswamy, Kumaradevan Punithakumar, Michelle Noga

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldMedicine
TopicAdvanced MRI Techniques and Applications
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsComputer visionArtificial intelligenceComputer scienceFrame (networking)Tracking (education)Image registrationInterpolation (computer graphics)Reference frameImage (mathematics)

Abstract

fetched live from OpenAlex

Cardiac magnetic resonance (MR) tissue tagging offers an excellent solution for tracking deformation and is considered the reference standard for the quantification of strain. However, due to the requirements for a dedicated acquisition sequence and post-processing software, tagged MR acquisitions are performed much less frequently in routine clinical practice than the anatomical cine MR sequence. Using tagged MR as the reference standard, this study proposes an approach to evaluate a diffeomorphic image registration algorithm applied on cine MR images to compute the cardiac deformation. In contrast to previous evaluation methods that compared the final results, such as strain, computed from cine and tagged MR sequences, the proposed method performs a direct frame-to-frame comparison in the evaluation. To overcome the problem of misalignment between the tagged and cine MR images, the proposed approach performs transformations to and from the two-dimensional image pixel coordinates and three-dimensional space using the meta-information encoded in the MR images. Linear temporal interpolation is performed using the frame acquisition time since the last R-wave peak value of the electrocardiogram signal recorded in the meta-information. Several statistic measures are computed and reported for the registration error using the Euclidean distances between the corresponding set of points obtained using cine and tagged MR images.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.005
metaresearch head score (Gemma)0.016
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.024

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0050.016
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.045
GPT teacher head0.325
Teacher spread0.280 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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