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Record W3083431556 · doi:10.1101/2022.02.10.479780

Assessing Quantitative MRI Techniques using Multimodal Comparisons

2022· preprint· en· W3083431556 on OpenAlexaff
Francis Carter, Alfred Anwander, Thomás Goucha, Helyne Adamson, Angela D. Friederici, Antoine Lutti, Claudine Gauthier, Nikolaus Weiskopf, Pierre‐Louis Bazin, Christopher J. Steele

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2022
Typepreprint
Languageen
FieldMedicine
TopicAdvanced Neuroimaging Techniques and Applications
Canadian institutionsMontreal Heart InstituteUniversité de MontréalConcordia University
Fundersnot available
KeywordsFractional anisotropyWhite matterNeuroscienceContext (archaeology)Brain tissueDiffusion MRIGrey matterSet (abstract data type)PsychologyMagnetization transferCognitive neuroscienceComputer scienceContrast (vision)CognitionArtificial intelligenceBiologyMedicineMagnetic resonance imaging

Abstract

fetched live from OpenAlex

Abstract The study of brain structure and change in neuroscience is commonly conducted using macroscopic morphological measures of the brain such as regional volume or cortical thickness, providing little insight into the microstructure and physiology of the brain. In contrast, quantitative MRI allows the monitoring of microscopic brain change non-invasively in-vivo, and provides normative values for comparisons between tissues, regions, and individuals. To support the development and common use of qMRI for cognitive neuroscience, we analysed a set of qMRI metrics (R1, R2*, Magnetization Transfer saturation, Proton Density saturation, Fractional Anisotropy, Mean Diffusivity) in 101 healthy young adults. Here we provide a comprehensive descriptive analysis of these metrics and their linear relationships to each other in grey and white matter to develop a more complete understanding of the relationship to tissue microstructure. Furthermore, we provide evidence that combinations of metrics may uncover informative gradients across the brain by showing that lower variance components of PCA may be used to identify cortical gradients otherwise hidden within individual metrics. We discuss these results within the context of microstructural and physiological neuroscience research.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.011
metaresearch head score (Gemma)0.037
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.011
Threshold uncertainty score0.057

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0110.037
Meta-epidemiology (narrow)0.0020.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0060.004
Science and technology studies0.0010.002
Scholarly communication0.0040.003
Open science0.0010.002
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0050.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.113
GPT teacher head0.385
Teacher spread0.272 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2022
Admission routes1
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)→Same topicAdvanced Neuroimaging Techniques and Applications→French-language works237,207→