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Record W3084144849 · doi:10.1080/10920277.2020.1775654

The Mathematical Mechanism of Biological Aging

2020· article· en· W3084144849 on OpenAlexaff
Boquan Cheng, Bruce L. Jones, Xiaoming Liu, Jiandong Ren

Bibliographic record

VenueNorth American Actuarial Journal · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetics, Aging, and Longevity in Model Organisms
Canadian institutionsWestern University
FundersThe Institute and Faculty of Actuaries
KeywordsMechanism (biology)Representation (politics)Process (computing)Markov processComputer scienceMarkov chainStatistical physicsMathematicsStatisticsMachine learningPhysics

Abstract

fetched live from OpenAlex

Despite aging being a universal and ever-present biological phenomenon, describing this aging mechanism in accurate mathematical terms—in particular, how to model the aging pattern and quantify the aging rate—has been an unsolved challenge for centuries. In this article, we propose a class of Coxian-type Markovian models that can provide a quantitative description of the well-known aging characteristics—the genetically determined, progressive, and essentially irreversible process. Our model has a unique structure, including a constant transition rate for the aging process, and a functional form for the relationship between aging and death with a shape parameter to capture the biologically deteriorating effect due to aging. The force of moving from one state to another in the Markovian process indicates the intrinsic biological aging force. The associated increasing exiting rate captures the external force of stress due to mortality risk on a living organism. The idea of the article is developed from Lin and Liu's paper, “Markov Aging Process and Phase-type Law of Mortality,” that was published in 2007. A big difference is that, in this article, our model uses a functional form for model parameters, which allows a parsimonious yet flexible representation for various aging patterns. Our proposed mathematical framework can be used to classify the aging pattern and the key parameters of the model can be used to measure and compare how human aging evolves over time and across populations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.000
Science and technology studies0.0000.002
Scholarly communication0.0010.002
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.242
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2020
Admission routes1
Has abstractyes

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Same venueNorth American Actuarial JournalSame topicGenetics, Aging, and Longevity in Model OrganismsFrench-language works237,207