MétaCan
Menu
Back to cohort
Record W3088793305 · doi:10.25011/cim.v43i3.34597

Association of TBXA2R, P2Y12 and ADD1 genes polymorphisms with ischemic stroke susceptibility: a metaanalysis

2020· review· en· W3088793305 on OpenAlexvenueno aff
Xue-Song Liang, You Zhou, Shuoxi Li

Bibliographic record

VenueClinical and investigative medicine · 2020
Typereview
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCongenital heart defects research
Canadian institutionsnot available
Fundersnot available
KeywordsFunnel plotPublication biasMeta-analysisMedicineStroke (engine)Ischemic strokeInternal medicineGenetic associationBioinformaticsSingle-nucleotide polymorphismGeneGeneticsBiologyIschemiaGenotype

Abstract

fetched live from OpenAlex

Background Ischemic stroke is a common cause of death and disability throughout the world. We aimed to evaluate the association between polymorphisms in TBXA2R (rs4523, rs768963, rs1131882), P2Y12 (rs204693), ADD1 (rs4961) and risk of ischemic stroke. Methods A comprehensive retrieval with the databases of Pubmed, Embase, CENTRAL, CNKI and Wan fang data was conducted. The deadline was February 1, 2019. Pooled ORs and 95% CIs were calculated by using the Z-test. Heterogeneity between the included studies was tested using the I2 method. Begg’s funnel plot and Egger’s linear regression were used to evaluate the publication bias. Software STATA 12.0 (StataCorp, College Station, TX, USA) was used for the meta-analysis and 26 studies with 5,776 cases and 8,025 controls were included. Results The results indicated significantly higher risk of ischemic stroke associated with TBXA2R variant rs768963 in all genetic models (C vs T: OR=1.27, 95% CI=1.13-1.42, P<0.0001; CC vs TT: OR=1.74, 95% CI=1.36-2.22, P<0.0001; CT vs TT: OR=1.73, 95% CI=1.41, 2.13, P<0.0001; CC+CT vs TT: OR=1.69, 95% CI=1.39-2.06, P<0.0001). Higher risk of ischemic stroke was also found to be associated with P2Y12 variant rs204693 in homozygous model and allelic model (CC vs TT: OR=3.17, 95% CI=1.33-7.55, P=0.009; C vs T: OR=1.47, 95% CI=1.00-2.15, P=0.047). No association was observed for TBXA2R variant rs1131882, rs4523 and ADD1 variant rs4691. Conclusions The TBXA2R variant rs768963 and P2Y12 variant rs2046934 may be predictive of the risk of ischemic stroke. Further studies with large sample sizes are warranted and should consider both ethnicity and environmental factors.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.011
metaresearch head score (Gemma)0.016
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Meta-analysis · Consensus signal: Meta-analysis
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.016
Threshold uncertainty score0.059

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0110.016
Meta-epidemiology (narrow)0.0040.002
Meta-epidemiology (broad)0.0160.058
Bibliometrics0.0050.006
Science and technology studies0.0010.001
Scholarly communication0.0030.001
Open science0.0020.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0040.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.137
GPT teacher head0.388
Teacher spread0.251 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designMeta-analysis
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2020
Admission routes1
Has abstractyes

Explore more

Same venueClinical and investigative medicineSame topicCongenital heart defects researchFrench-language works237,207