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Record W3088832250 · doi:10.11575/prism/38231

Distribution and habitat characteristics of Tubifex tubifex, intermediate host of whirling disease, in Banff National Park

2020· dissertation· en· W3088832250 on OpenAlexaboutno aff
Colby Whelan

Bibliographic record

VenueOpen MIND · 2020
Typedissertation
Languageen
FieldMedicine
TopicViral Infections and Vectors
Canadian institutionsnot available
Fundersnot available
KeywordsTubifex tubifexNational parkTubifexHabitatEcologyHost (biology)GeographyDistribution (mathematics)BiologyMathematics

Abstract

fetched live from OpenAlex

Whirling Disease was discovered in Canada for the first time in 2016, at Johnson Lake, Banff National Park. The disease is caused by the parasite Myxobolus cerebralis and has caused major declines in trout populations in the United States. The presence of whirling disease in Banff National Park could be detrimental to the recovery of the two native trout species, which are both listed as threatened. The parasite affects salmonid fish, but also requires a second obligate host, the oligochaete, Tubifex tubifex. The presence and distribution of T. tubifex in a waterbody are important factors to predict where M. cerebralis may spread. Occupancy modelling was tested as a method for surveying the distribution of T. tubifex at the site of first detection, Johnson Lake. T. tubifex were present, though had a patchy distribution with low detection probability. High inorganic carbon concentration in the lake sediment was negatively associated with T. tubifex presence. Two watersheds within Banff National Park were also surveyed, zero T. tubifex were found within the Cascade watershed, while T. tubifex had a patchy distribution within the Spray watershed. Habitat covariates were tested using General Linear Models, and T. tubifex were found to be significantly associated with low landscape level slope, and a small contributing area. These results suggest that the presence of T. tubifex is not ubiquitous in waterbodies in the region and understanding habitat could help discover areas with T. tubifex presence.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.653
Threshold uncertainty score0.689

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.324
Teacher spread0.298 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2020
Admission routes1
Has abstractyes

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