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S1690 A Case of Rhodococcus Related Colonic Malakoplakia in a Renal Transplant Patient

2020· article· en· W3093511104 on OpenAlexaff
Jenan Ghaith, Johane P. Allard, Stefano Serra

Bibliographic record

VenueThe American Journal of Gastroenterology · 2020
Typearticle
Languageen
FieldMedicine
TopicInfectious Disease Case Reports and Treatments
Canadian institutionsUniversity Health NetworkUniversity of Toronto
Fundersnot available
KeywordsMalakoplakiaMedicineImmunosuppressionPathologyColonoscopyGastroenterologyInternal medicineColorectal cancerCancer

Abstract

fetched live from OpenAlex

INTRODUCTION: Malakoplakia is a rare disease that involves the gastrointestinal tract. It is seen in immunocompromised patients. Chronic bacterial infections such as Escherichia coli, Proteus mirabilis, and Mycobacterium tuberculosis can lead to malakoplakia. Rarely, rhodococcus Equi, a zoonotic bacterium, is believed to be the infectious culprit. Malakoplakia is diagnosed with tissue biopsy and cultures. We present a case of colonic malakoplakia mimicking malignancy in an immunosuppressed patient with a kidney transplant. CASE DESCRIPTION/METHODS: A 75-years old male patient with a kidney transplant on tacrolimus and prednisone was referred to our department for work-up of iron deficiency anemia. He was also known for hypertension, diabetes, obstructive and atrial fibrillation. He is a farmer and lives in close proximity to live stocks and horses. He has suffered acute antibody rejection shortly after the transplant which required transient intensification of his immunosuppression with Mycophenolic Acid and Immunoglobulin transfusion. A diagnostic colonoscopy revealed extensive flat and polypoid lesions with a nodular pattern in the cecum and proximal colon. The endoscopic appearance was consistent with granular lateral spreading tumor (LST). Biopsies were obtained and pathology have confirmed malakoplakia secondary to rhodococcus infection. He was treated with three months course of Ciprofloxacin resulting in partial resolution. He is currently receiving a prolonged antibiotic course with a planned colonoscopy follow-up. DISCUSSION: Malakoplakia is a rare granulomatous disease that affects many organs including the bladder, brain, lungs, and the colon. It is diagnosed through unique histological features known as Michaelis-Gutmann Bodies (histocytes with cytoplasmic inclusions). Endoscopic features include large nodular sessile or polypoid masses in the colon, which is easily misinterpreted as colonic neoplasia. It is associated with immunosuppression, HIV, malignancy, and chronic infections. However, sporadic cases of healthy subjects were reported. Rhodoccus equi is a gram-positive bacteria mainly known as an animal pathogen known to trigger ulcerative colitis in swine. Transmission to humans occurs through direct contact or inhalation. Clinical presentation is nonspecific and depends on location and size. A case report recorded an acute large bowel obstruction while another manifested as chronic diarrhea and abdominal pain. Treatment is limited to antimicrobial agents and supporting the immune system.Figure 1.: Laterally spreading nodular polypoid lesion occupying one-third of cecal circumfernce.Figure 2.: A second area representing sessile polypoid lesions with central depression.Figure 3.: Colonic biopsy demonstrated histocytes with eosinophilic granular cytoplasm.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: Case report
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.016

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0030.002
Science and technology studies0.0030.001
Scholarly communication0.0020.002
Open science0.0010.001
Research integrity0.0050.003
Insufficient payload (model declined to judge)0.0050.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.248
Teacher spread0.239 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations3
Published2020
Admission routes1
Has abstractyes

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