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Record W3094629282

Quantitative in vitro-in vivo extrapolation of biotransformation rates for bioaccumulation assessment: Focus on organic sunscreen agents in rainbow trout

2019· dissertation· en· W3094629282 on OpenAlexfundno aff
L. Saunders

Bibliographic record

VenueSummit (Simon Fraser University) · 2019
Typedissertation
Languageen
FieldEnvironmental Science
TopicEnvironmental Toxicology and Ecotoxicology
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of CanadaSimon Fraser UniversityU.S. Environmental Protection Agency
KeywordsRainbow troutBioaccumulationBiotransformationIn vivoIn vitroChemistryEnvironmental chemistryPharmacologyBiologyFisheryFish <Actinopterygii>BiochemistryBiotechnology
DOInot available

Abstract

fetched live from OpenAlex

An improved understanding of chemical biotransformation has been identified as a key requirement for the bioaccumulation assessment of commercial chemicals. In vitro biotransformation assays, in combination with in vitro-in vivo extrapolation (IVIVE) represents one initiative to generate chemical biotransformation rates for use in bioaccumulation modeling efforts. However, rigorous evaluation of the IVIVE approach requires studies with well-matched animals to ensure in vitro tests adequately predict in vivo biotransformation potential. Therefore, the overarching objective of this thesis was to evaluate factors that may influence the extrapolation of hepatic in vitro biotransformation rate constants (kdep) using well-matched studies with rainbow trout. Hydrophobic organic ultraviolet filters (UVFs) 4-methylbenzylidene camphor, 2-ethylhexyl-4-methoxycinnamate (EHMC), and octocrylene (OCT) represented model chemicals in this investigation. The first study showed that measured kdep values for UVFs were highly dependent on the selected assay concentration. Modeled bioconcentration factors (BCF) derived from kdep measured at concentrations well below corresponding Michaelis-Menten constants (KM) were closer to empirical BCFs than those calculated from kdep measured at higher test concentrations. A corresponding in vivo study demonstrated that during standardized dietary exposures that measured UVF concentrations in trout were well below the previously derived KM values This demonstrated that biotransformation pathways in trout operate under first-order conditions and that working at an appropriate concentration range in in vitro assays (i.e., C0 << KM) can be expected to improve estimates of in vivo biotransformation potential. In a final study, an existing IVIVE model was expanded to consider biotransformation in both the intestinal epithelia and liver. For chemicals biotransformed at higher rates by hepatic S9 fractions (e.g., EHMC), the ‘liver only’ IVIVE model was sufficient in estimating whole-body biotransformation rate constants (kMET). For chemicals biotransformed at higher rates in intestinal S9 fractions (i.e., OCT), the inclusion of both hepatic and intestinal activities improved estimates of kMET relative to the in vivo data generated here. The results of this study indicate that current ‘liver only’ IVIVE approaches may underestimate kMET for chemicals that undergo substantial intestinal biotransformation. The presented findings suggest that the future use of quantitative IVIVE methods for bioaccumulation assessment require greater consideration of extrahepatic biotransformation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.008
Threshold uncertainty score0.017

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.286
Teacher spread0.263 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

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