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Record W3094778818 · doi:10.1139/cjps-2020-0059

Study of the genetic structure of a <i>Brassica napus</i> L. canola population derived from six interspecific crosses of <i>B. napus</i> × <i>B. oleracea</i>

2020· article· en· W3094778818 on OpenAlexaffvenue
Azam Nikzad, Berisso Kebede, Jani Bhavikkumar, Habibur Rahman

Bibliographic record

VenueCanadian Journal of Plant Science · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomics and Phylogenetic Studies
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsBrassica oleraceaCanolaBiologyIntrogressionPopulationGenetic diversityBrassicaBotanyAgronomyGeneticsGene

Abstract

fetched live from OpenAlex

Broadening the genetic base of the C genome of Brassica napus L. canola is needed for continued improvement of this crop. For this, we developed few hundred canola lines from B. napus × Brassica oleracea L. interspecific crosses involving a B. napus canola line and six B. oleracea accessions belonging to four varieties, viz. vars. alboglabra, botrytis, capitata, and italica, and following two breeding methods [F2 and BC1 (F1 × B. napus) derived lines]. The objective of this study was to understand the genetic structure of this population regarding the alleles introgressed from B. oleracea by using simple sequence repeat markers and to investigate the inheritance of B. oleracea alleles in these reconstituted canola lines. Marker analysis showed that the four B. oleracea varieties were genetically quite distinct. Several canola lines derived from these six crosses tended to group together with their B. oleracea parent demonstrating that the wide diversity of the B. oleracea gene pool can be exploited for broadening the genetic base of the C genome of B. napus canola. Loss of several B. oleracea alleles occurred during the development of these inbred lines. While comparing the two breeding methods for introgression of B. oleracea alleles, significantly greater loss of alleles occurred in the F2-derived population as compared with the BC1-derived population. Thus, the knowledge from this study can be used for efficient introgression of exotic alleles from B. oleracea into B. napus for broadening the genetic base of this crop.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.209
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2020
Admission routes2
Has abstractyes

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