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Record W3097045445 · doi:10.1371/journal.pbio.3000935

Expanding conservation culturomics and iEcology from terrestrial to aquatic realms

2020· article· en· W3097045445 on OpenAlexafffund
Ivan Jarić, Uri Roll, Robert Arlinghaus, Jonathan Belmaker, Yan Chen, Victor China, Karel Douda, Franz Essl, Sonja C. Jähnig, Jonathan M. Jeschke, Gregor Kalinkat, Lukáš Kalous, Richard J. Ladle, Robert J. Lennox, Rui Rosa, Valerio Sbragaglia, Kate Sherren, Marek Šmejkal, Andrea Soriano‐Redondo, Allan T. Souza, Christian Wolter, Ricardo A. Correia

Bibliographic record

VenuePLoS Biology · 2020
Typearticle
Languageen
FieldPsychology
TopicAnimal and Plant Science Education
Canadian institutionsDalhousie University
FundersEuropean Social FundEuropean Regional Development FundHelsingin YliopistoFundação para a Ciência e a TecnologiaSocial Sciences and Humanities Research Council of CanadaHELSUS Kestävyystieteen InstituuttiBundesministerium für Bildung und ForschungTechnology Agency of the Czech RepublicMinisterio de Ciencia, Innovación y UniversidadesGrantová Agentura České RepublikyNorges ForskningsrådAkademie Věd České RepublikyAustrian Science Fund
KeywordsRealmThreatened speciesContext (archaeology)Identification (biology)Environmental resource managementBig dataBiologyData scienceEnvironmental planningEcologyGeographyComputer scienceHabitatArchaeology

Abstract

fetched live from OpenAlex

The ongoing digital revolution in the age of big data is opening new research opportunities. Culturomics and iEcology, two emerging research areas based on the analysis of online data resources, can provide novel scientific insights and inform conservation and management efforts. To date, culturomics and iEcology have been applied primarily in the terrestrial realm. Here, we advocate for expanding such applications to the aquatic realm by providing a brief overview of these new approaches and outlining key areas in which culturomics and iEcology are likely to have the highest impact, including the management of protected areas; fisheries; flagship species identification; detection and distribution of threatened, rare, and alien species; assessment of ecosystem status and anthropogenic impacts; and social impact assessment. When deployed in the right context with awareness of potential biases, culturomics and iEcology are ripe for rapid development as low-cost research approaches based on data available from digital sources, with increasingly diverse applications for aquatic ecosystems.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.014
metaresearch head score (Gemma)0.050
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.017
Threshold uncertainty score0.074

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0140.050
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0170.011
Science and technology studies0.0020.005
Scholarly communication0.0080.011
Open science0.0020.010
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0170.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.118
GPT teacher head0.340
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations78
Published2020
Admission routes2
Has abstractyes

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