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Unraveling Mechanisms behind Biomass–Clay Interactions Using Comprehensive Multiphase Nuclear Magnetic Resonance (NMR) Spectroscopy

2020· article· en· W3097375247 on OpenAlexafffund
Melisa S. Olivelli, Ioana Fugariu, Rosa M. Torres Sánchez, Gustavo Curutchet, André J. Simpson, Myrna J. Simpson

Bibliographic record

VenueACS Earth and Space Chemistry · 2020
Typearticle
Languageen
FieldPhysics and Astronomy
TopicNMR spectroscopy and applications
Canadian institutionsThe Scarborough HospitalUniversity of Toronto
FundersFondo Argentino SectorialUniversity of Toronto ScarboroughNatural Sciences and Engineering Research Council of CanadaUniversity of TorontoMinisterio de Ciencia, Tecnología e Innovación ProductivaAgencia Nacional de Promoción Científica y TecnológicaConsejo Nacional de Investigaciones Científicas y TécnicasUniversidad Nacional de San MartínCanada Research Chairs
KeywordsBiomass (ecology)Nuclear magnetic resonance spectroscopyClay mineralsChemistrySoil waterEnvironmental chemistrySpectroscopyOrganic matterTwo-dimensional nuclear magnetic resonance spectroscopyChemical engineeringOrganic chemistrySoil scienceMineralogyEnvironmental scienceEcologyStereochemistryBiology

Abstract

fetched live from OpenAlex

The interactions of the different components of soils, such as living biomass and organic matter, with mineral surfaces are of considerable interest due to their environmental reactivity and potential for improving carbon storage in the long-term. Also, microbial species are known to participate in key soil processes, and it has been hypothesized that microbes do not just sorb to minerals but also actively bind to minerals and may even play an important role in mineral formation. Nuclear magnetic resonance (NMR) spectroscopy is one of the most powerful tools to study the structure and association in complex samples. A new NMR technique, referred to as comprehensive multiphase (CMP) NMR spectroscopy, has been applied to analyze unaltered samples in novel NMR experiments to study structures and interactions in situ. In this research, we use CMP-NMR to study biomass–clay interactions in laboratory-generated biomass–clay complexes. CMP-NMR analyses showed that fungal biomass associates with clay mainly via aliphatic functional groups, while carbohydrates dominate at the clay–water interface. The results for bacterial cells suggest the formation of a biofilm that attached non-specifically to clay surfaces. This is the first time that a molecular approach of whole-cell attachment to clay in biomass–clay complexes is obtained with this technique. This in-depth molecular information provides a unique insight into the binding mechanisms between biomass and clay minerals. This novel information can improve the fundamental understanding of soil organic matter formation and stabilization processes involved in soil formation, as well as the role of the mineral fraction of whole soils in biomass/organic matter protection or the preferential binding of pollutants.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.022
Threshold uncertainty score0.878

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.287
Teacher spread0.272 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations32
Published2020
Admission routes2
Has abstractyes

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