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Record W3103332312 · doi:10.1111/geb.13210

RivFishTIME: A global database of fish time‐series to study global change ecology in riverine systems

2020· article· en· W3103332312 on OpenAlexaff
Lise Comte, Juan D. Carvajal‐Quintero, Pablo A. Tedesco, Xingli Giam, Ulrich Brose, Tibor Erős, Ana Filipa Filipe, Marie‐Josée Fortin, Katie Irving, Claire Jacquet, Stefano Larsen, Sapna Sharma, Albert Ruhí, Fernando Gertum Becker, Lílian Casatti, Giuseppe Castaldelli, Renato Bolson Dala‐Corte, Stephen Davenport, Nathan R. Franssen, Emili García‐Berthou, Anna Gavioli, Keith B. Gido, Luz F. Jiménez‐Segura, Rafael P. Leitão, Bill McLarney, Jason Meador, Marco Milardi, David B. Moffatt, Thiago Vinicius Occhi, Paulo dos Santos Pompeu, David L. Propst, Mark Pyron, Gilberto Nepomuceno Salvador, Jerome A. Stefferud, Tapio Sutela, Christopher M. Taylor, Akira Terui, Hirokazu Urabe, Teppo Vehanen, Jean Ricardo Simões Vitule, Jaquelini O. Zeni, Julian D. Olden

Bibliographic record

VenueGlobal Ecology and Biogeography · 2020
Typearticle
Languageen
FieldEnvironmental Science
TopicFish Ecology and Management Studies
Canadian institutionsYork UniversityUniversity of Toronto
FundersWWF InternationalNational Forest FoundationDeutsche ForschungsgemeinschaftNew Mexico Department of Game and FishConselho Nacional de Desenvolvimento Científico e TecnológicoNational Fish and Wildlife FoundationDeutsches Zentrum für integrative Biodiversitätsforschung Halle-Jena-LeipzigTennessee Valley AuthorityWorld Wildlife Fund
KeywordsDatabaseEcologyGeographyMacroecologyBiodiversityActinopterygiiFreshwater fishAbundance (ecology)IchthyologyGlobal changeFish <Actinopterygii>Climate changeFisheryBiologyComputer science

Abstract

fetched live from OpenAlex

Abstract Motivation We compiled a global database of long‐term riverine fish surveys from 46 regional and national monitoring programmes and from individual academic research efforts, with which numerous basic and applied questions in ecology and global change research can be explored. Such spatially and temporally extensive datasets have been lacking for freshwater systems in comparison to terrestrial ones. Main types of variables contained The database includes 11,386 time‐series of riverine fish community catch data, including 646,270 species‐specific abundance records, together with metadata related to the geographical location and sampling methodology of each time‐series. Spatial location and grain The database contains 11,072 unique sampling locations (stream reach), spanning 19 countries, five biogeographical realms and 402 hydrographical basins world‐wide. Time period and grain The database encompasses the period 1951–2019. Each time‐series is composed of a minimum of two yearly surveys (mean = 8 years) and represents a minimum time span of 10 years (mean = 19 years). Major taxa and level of measurement The database includes 944 species of ray‐finned fishes (Class Actinopterygii). Software format csv. Main conclusion Our collective effort provides the most comprehensive long‐term community database of riverine fishes to date. This unique database should interest ecologists who seek to understand the impacts of human activities on riverine fish biodiversity and to model and predict how fish communities will respond to future environmental change. Together, we hope it will promote advances in macroecological research in the freshwater realm.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.031
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.224
Teacher spread0.213 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations82
Published2020
Admission routes1
Has abstractyes

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