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Record W3109117043 · doi:10.1002/2688-8319.12031

Examining assumptions of soil microbial ecology in the monitoring of ecological restoration

2020· article· en· W3109117043 on OpenAlex
Miranda M. Hart, Adam T. Cross, Haylee D’Agui, Kingsley W. Dixon, Mieke van der Heyde, Bede S. Mickan, Christina Horst, Benjamin Moreira Grez, Justin M. Valliere, Raphael A. Viscarra Rossel, Andrew S. Whiteley, Wei Wong, Hongtao Zhong, Paul Nevill

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueEcological Solutions and Evidence · 2020
Typearticle
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsUniversity of British Columbia, Okanagan CampusUniversity of British Columbia
FundersCurtin University of TechnologyAustralian Government
KeywordsRestoration ecologyEcologyBenchmark (surveying)Environmental scienceEnvironmental DNAEnvironmental resource managementMicrobial population biologyBiologyGeographyBiodiversityCartography

Abstract

fetched live from OpenAlex

Abstract 1. Global interest in building healthy soils combined with new DNA sequencing technologies has led to the generation of a vast amount of soil microbial community (SMC) data. 2. SMC analysis is being adopted widely for monitoring ecological restoration trajectories. However, despite the large and growing quantity of soil microbial data, it remains unclear how these data inform and best guide restoration practice. 3. Here, we examine assumptions around SMC as a tool for guiding ecosystem restoration and evaluate the effectiveness of using species inventories of SMC as a benchmark for restoration success. 4. We investigate other approaches of assessing soil health, and conclude that we can significantly enhance the utility of species inventory data for ecological restoration by complementing it with the use of non‐molecular approaches.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.117
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.150
GPT teacher head0.291
Teacher spread0.141 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it