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Record W3110603267 · doi:10.1093/jas/skaa278.450

PSXII-23 Identification and evaluation of novel fertility traits using automated activity monitor data from commercial dairy herds

2020· article· en· W3110603267 on OpenAlexaff
Camila A Rosenberg, Diércles F. Cardoso, F. Malchiodi, Flávio S. Schenkel, Christine F. Baes

Bibliographic record

VenueJournal of Animal Science · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and phenotypic traits in livestock
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsFertilityHerdHeritabilityBiologyDairy cattleAnimal scienceBiotechnologyTraitDemographyMedicinePopulationEnvironmental healthComputer scienceGenetics

Abstract

fetched live from OpenAlex

Abstract The reproductive performance of dairy herds is a determinant factor in their production efficiency and long-term profitability. While the genetic improvement of fertility in cows has been a top breeding objective, its success has been constrained by the low heritability of current traits and the negative impact of management practices on trait measurement accuracy. The recent development and adoption of automated sensor technologies, such as activity monitors, within dairy production systems have provided new opportunities to identify relevant and cost-effective phenotypes of fertility. To date, several activity-based measurements of estrus expression have been associated with fertility outcomes and may, therefore, be suitable predictors of female fertility. The objective of this study was to identify and evaluate novel estrus-related fertility traits using automated activity monitor (AAM) data from commercial dairy herds. A total of 8,730,987 records consisting of 10,529 estrus events were collected between January 2019 and March 2020 from 2,434 cows and 689 heifers of two U.S. commercial herds, where cows were fitted with collar-mounted accelerometers (Heatime, SCR Engineers Ltd., Netanya, Israel). The AAM dataset contained individual bi-hourly activity and rumination patterns, as well as computed fertility index scores, which were used to derive fertility traits related to estrus duration and intensity. The mean number of estrus events per cow and heifer was 4.06 ± 0.04 and 2.63 ± 0.07, respectively, with 1,408 of estruses resulting in pregnancy. Traditional fertility traits were calculated from the breeding record information of 3,255 animals. An estimation of the heritabilities along with genetic and phenotypic correlations between the novel estrus-related fertility traits and traditional fertility traits was undertaken using the program AIREML. Outputs from this project are expected to provide further insight on how to best use AAM measurements to improve selection for reproductive performance in commercial dairy herds.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.008
Threshold uncertainty score0.016

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.149
GPT teacher head0.381
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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