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Record W3110886267 · doi:10.1101/2020.12.07.414268

Early induction of antibacterial activities distinguishes response of mice to infection with non-permissive from response to permissive <i>Salmonella</i>

2020· preprint· en· W3110886267 on OpenAlexaff
Jitender Yadav, Ayub Qadri

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2020
Typepreprint
Languageen
FieldNursing
TopicVitamin C and Antioxidants Research
Canadian institutionsUniversity of Toronto
FundersNational Institute of Immunology
KeywordsMicrobiologySalmonella typhiTyphoid feverBiologySalmonellaSalmonella entericaTyphoid vaccineIn vitroExtracellularIn vivoSerotypeIntracellularSerine proteaseVirologyBacteriaProteaseCell biologyBiochemistryEscherichia coliEnzymeGene

Abstract

fetched live from OpenAlex

Abstract Salmonella enterica serovar Typhi ( S . Typhi), the causative agent of typhoid in humans, shares very high homology with closely related serovar, S . Typhimurium. Yet, unlike S . Typhimurium, S . Typhi does not establish infection in mice, the reasons for which are not well understood. Here, we present evidence that unlike S . Typhimurium, S . Typhi brings about induction of extracellular and intracellular antibacterial activities in mice. Cell-free peritoneal fluids from S . Typhi but not S . Typhimurium-infected mice inhibited replication of Salmonella ex vivo . The production of this activity was reduced in presence of serine protease inhibitor, phenylmethylsulfonlyl fluoride (PMSF). PMSF also inhibited generation of antibacterial activity released from in vitro S . Typhi - infected peritoneal macrophages in a cell death – dependent manner. Intracellularly, infection with S . Typhi in vitro as well as in vivo resulted in increased mRNA levels of iron-regulating molecules, ferroportin and lipocalin. These results suggest that induction of antibacterial molecules early on in mice in response to S . Typhi may prevent establishment of infection with this Salmonella serovar.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.257
Teacher spread0.240 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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Same venuebioRxiv (Cold Spring Harbor Laboratory)Same topicVitamin C and Antioxidants ResearchFrench-language works237,207