MétaCan
Menu
Back to cohort

Electronic Health Records and Pulmonary Function Data: Developing an Interoperability Roadmap. An Official American Thoracic Society Workshop Report

2021· article· en· W3114949403 on OpenAlexaff
Meredith C. McCormack, Rebecca Bascom, Michael T. Brandt, Felip Burgos, Sam Butler, Christopher Caggiano, A.E.F. Dimmock, Adrian Fineberg, Jeffrey Goldstein, Francisco C. Guzman, Cara N. Halldin, Jeffery D. Johnson, Gwendolyn S. Kerby, Jerry A. Krishnan, Laura Kurth, Gareth Morgan, Richard A. Mularski, C.B. Pasquale, Julie Ryu, Tom Sinclair, Nadia F. Stachowicz, Ann K. Taite, Jacob Tilles, Jennifer R. Truta, David N. Weissman, Tianshi David Wu, Barbara P. Yawn, Michael Drummond

Bibliographic record

VenueAnnals of the American Thoracic Society · 2021
Typearticle
Languageen
FieldMedicine
TopicChronic Obstructive Pulmonary Disease (COPD) Research
Canadian institutionsQueen's University
FundersNational Heart, Lung, and Blood InstituteAmerican Thoracic Society
KeywordsMedicineInteroperabilityPulmonary function testingFunction (biology)Pulmonary medicineHealth recordsData scienceIntensive care medicineHealth careWorld Wide WebInternal medicineEconomic growth

Abstract

fetched live from OpenAlex

Abstract A workshop “Electronic Health Records and Pulmonary Function Data: Developing an Interoperability Roadmap” was held at the American Thoracic Society 2019 International Conference. “Interoperability” is defined as is the ability of different information-technology systems and software applications to directly communicate, exchange data, and use the information that has been exchanged. At present, pulmonary function test (PFT) equipment is not required to be interoperable with other clinical data systems, including electronic health records (EHRs). For this workshop, we assembled a diverse group of experts and stakeholders, including representatives from patient-advocacy groups, adult and pediatric general and pulmonary medicine, informatics, government and healthcare organizations, pulmonary function laboratories, and EHR and PFT equipment and software companies. The participants were tasked with two overarching Aobjectives: 1) identifying the key obstacles to achieving interoperability of PFT systems and the EHR and 2) recommending solutions to the identified obstacles. Successful interoperability of PFT data with the EHR impacts the full scope of individual patient health and clinical care, population health, and research. The existing EHR–PFT device platforms lack sufficient data standardization to promote interoperability. Cost is a major obstacle to PFT–EHR interoperability, and incentives are insufficient to justify the needed investment. The current vendor–EHR system lacks sufficient flexibility, thereby impeding interoperability. To advance the goal of achieving interoperability, next steps include identifying and standardizing priority PFT data elements. To increase the motivation of stakeholders to invest in this effort, it is necessary to demonstrate the benefits of PFT interoperability across patient care and population health.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.147
metaresearch head score (Gemma)0.073
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.147
Threshold uncertainty score0.779

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1470.073
Meta-epidemiology (narrow)0.0020.002
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0090.005
Science and technology studies0.0050.004
Scholarly communication0.0160.030
Open science0.0050.015
Research integrity0.0080.011
Insufficient payload (model declined to judge)0.0070.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.138
GPT teacher head0.454
Teacher spread0.316 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations19
Published2021
Admission routes1
Has abstractyes

Explore more

Same venueAnnals of the American Thoracic SocietySame topicChronic Obstructive Pulmonary Disease (COPD) ResearchFrench-language works237,207