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Record W3116573389 · doi:10.1007/s00428-020-02982-7

Maximizing the diagnostic information from biopsies in chronic inflammatory bowel diseases: recommendations from the Erlangen International Consensus Conference on Inflammatory Bowel Diseases and presentation of the IBD-DCA score as a proposal for a new index for histologic activity assessment in ulcerative colitis and Crohn’s disease

2020· review· en· W3116573389 on OpenAlexaff
Corinna Lang‐Schwarz, Abbas Agaimy, Raja Atreya, Christoph Becker, Silvio Danese, Jean–François Fléjou, Nikolaus Gaßler, Heike I. Grabsch, Arndt Hartmann, Kateřina Kamarádová, Anja A. Kühl, Gregory Y. Lauwers, Alessandro Lugli, Irıs D. Nagtegaal, Markus F. Neurath, Georg Oberhuber, Laurent Peyrin‐Biroulet, Timo Räth, Robert H. Riddell, Carlos A. Rubio, Kieran Sheahan, Herbert Tilg, Vincenzo Villanacci, Maria Westerhoff, Michael Vieth

Bibliographic record

VenueArchiv für Pathologische Anatomie und Physiologie und für Klinische Medicin · 2020
Typereview
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicInflammatory Bowel Disease
Canadian institutionsSinai Health SystemCanada Research ChairsUniversity of TorontoMount Sinai Hospital
FundersDeutsche Forschungsgemeinschaft
KeywordsMedicineUlcerative colitisInflammatory bowel diseaseConcordanceInternal medicineDiseaseGastroenterologyEndoscopyCrohn's disease

Abstract

fetched live from OpenAlex

Chronic idiopathic inflammatory bowel disease (IBD) cases are on the rise, with approximately 6.8 million people diagnosed in 2017 [ 1 ]. Diagnosing the two main forms of IBD, ulcerative colitis (UC) and Crohn’s disease (CD), involves a combination of clinical history, laboratory findings, imaging, endoscopy and histology [ 2 ].

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.012
metaresearch head score (Gemma)0.015
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.012
Threshold uncertainty score0.000

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0120.015
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0040.002
Bibliometrics0.0060.004
Science and technology studies0.0000.002
Scholarly communication0.0030.003
Open science0.0030.001
Research integrity0.0030.004
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.353
Teacher spread0.320 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations46
Published2020
Admission routes1
Has abstractyes

Explore more

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