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Record W3117193295 · doi:10.3767/persoonia.2020.45.10

Fungal Planet description sheets: 1112–1181

2020· article· en· W3117193295 on OpenAlexaffabout
P.W. Crous, Don A. Cowan, Gillian Maggs‐Kölling, Neriman Yılmaz, Ellen Larsson, Claudio Angelini, Tor Erik Brandrud, John Dearnaley, Bálint Dima, Francesco Dovana, Nigel Fechner, Dania García, Josepa Gené, Roy E. Halling, Jos Houbraken, Pierre Léonard, Janet Jennifer Luangsa-ard, Wasana Noisripoom, A.E. Rea-Ireland, Hana Ševčíková, Christopher W. Smyth, Alfredo Vizzini, J.D. Adam, Gerard C. Adams, A.V. Alexandrova, Alireza Alizadeh, Vera Andjic, Vladimír Antonín, Francisco Arenas, R. Assabgui, Josep Ballarà, Alicia Banwell, Akila Berraf-Tebbal, Vinod K. Bhatt, Gregory Bonito, W. J. Botha, Treena I. Burgess, Miroslav Caboň, Jed Calvert, Lília C. Carvalhais, R Courtecuisse, Penny Cullington, Naveed Davoodian, Cony Decock, R. Dimitrov, Simone Di Piazza, A. Drenth, Sylvain Dumez, Aleš Eichmeier, Javier Etayo, I. Fernández, Jean-Pierre Fiard, J Fournier, Stephanie E. Fuentes-Aponte, Mohammad Ali Tajick Ghanbary, Golzar Ghorbani, Alejandra Giraldo, А. М. Глушакова, Dilnora Gouliamova, Josep Guarro, F. Halleen, Felix Hampe, Margarita Hernández‐Restrepo, Isabel Iturrieta‐González, Mikael Jeppson, А. В. Качалкин, Omid Karimi, Abdul Nasir Khalid, Artit Khonsanit, J.I. Kim, K. Kim, Munazza Kiran, Irmgard Krisai‐Greilhüber, Viktor Kučera, Ivana Kušan, Shaun D. Langenhoven, Teresa Lebel, Renée Lebeuf, Kare Liimatainen, Celeste C. Linde, D.L. Lindner, L. Lombard, Alla Eddine Mahamedi, Neven Matočec, Aaron E. Maxwell, Tom W. May, Alistair R. McTaggart, Martin Meijer, Armin Mešić, A.J. Mileto, Andrew N. Miller, A. Molia, Suchada Mongkolsamrit, Catalina Cortés, JUSTO M. MUÑOZ-MOHEDANO, Asunción Morte, Olga Morozova, L. Mostert, Reza Mostowfizadeh‐Ghalamfarsa, László G. Nagy, Alfonso Navarro‐Ródenas, Leif Örstadius, Barrie E. Overton, Viktor Papp, Roberto Para, Ursula Peintner, Thị Hà Giang Phạm, A. Pordel, A Pošta, Antonio Rodrı́guez, Megan K. Romberg, Marcelo Sandoval‐Denis, Keith A. Seifert, Kamal C. Semwal, Brent J. Sewall, Roger G. Shivas, Marek Slovák, Kirsty F. Smith, Milan Špetík, Christoffel F. J. Spies, K. Syme, Kanoksri Tasanathai, R. Greg Thorn, Zdenko Tkalčec, M. A. Tomashevskaya, Daniel Torres-Garcia, Zia Ullah, Cobus M. Visagie, Andrus Voitk, L. M. Winton, J.Z. Groenewald

Bibliographic record

VenuePersoonia - Molecular Phylogeny and Evolution of Fungi · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsCarleton UniversityCenter for Northern StudiesGovernment of Newfoundland and LabradorDalhousie UniversityWestern UniversityAgriculture and Agri-Food Canada
Fundersnot available
KeywordsBiologyBotanyPlant litterEcologyEcosystem

Abstract

fetched live from OpenAlex

Novel species of fungi described in this study include those from various countries as follows: Australia , Austroboletus asper on soil, Cylindromonium alloxyli on leaves of Alloxylon pinnatum, Davidhawksworthia quintiniae on leaves of Quintinia sieberi, Exophiala prostantherae on leaves of Prostanthera sp., Lactifluus lactiglaucus on soil, Linteromyces quintiniae (incl. Linteromyces gen. nov.) on leaves of Quintinia sieberi , Lophotrichus medusoides from stem tissue of Citrus garrawayi , Mycena pulchra on soil, Neocalonectria tristaniopsidis (incl. Neocalonectria gen. nov.)and Xyladictyochaeta tristaniopsidis on leaves of Tristaniopsis collina, Parasarocladium tasmanniae on leaves of Tasmannia insipida , Phytophthora aquae-cooljarloo from pond water, Serendipita whamiae as endophyte from roots of Eriochilus cucullatus , Veloboletus limbatus (incl. Veloboletus gen. nov.)onsoil. Austria , Cortinarius glaucoelotus onsoil. Bulgaria , Suhomyces rilaensis from the gut of Bolitophagus interruptus found on a Polyporus sp. Canada , Cantharellus betularum among leaf litter of Betula , Penicillium saanichii from house dust. Chile , Circinella lampensis on soil, Exophiala embothrii from rhizosphere of Embothrium coccineum . China, Colletotrichum cycadis on leaves of Cycas revoluta . Croatia , Phialocephala melitaea on fallen branch of Pinus halepensis . Czech Republic , Geoglossum jirinae on soil, Pyrenochaetopsis rajhradensis from dead wood of Buxus sempervirens. Dominican Republic , Amanita domingensis on litter of deciduous wood, Melanoleuca dominicana on forest litter. France , Crinipellis nigrolamellata (Martinique) on leaves of Pisonia fragrans , Talaromyces pulveris from bore dust of Xestobium rufovillosum infesting floorboards. French Guiana , Hypoxylon hepaticolor on dead corticated branch. Great Britain , Inocybe ionolepis on soil. India , Cortinarius indopurpurascens among leaf litter of Quercus leucotrichophora . Iran , Pseudopyricularia javanii on infected leaves of Cyperus sp., Xenomonodictys iranica (incl. Xenomonodictys gen. nov.) on wood of Fagus orientalis . Italy , Penicillium vallebormidaense from compost. Namibia , Alternaria mirabibensis on plant litter, Curvularia moringae and Moringomyces phantasmae (incl. Moringomyces gen. nov.) on leaves and flowers of Moringa ovalifolia, Gobabebomyces vachelliae (incl. Gobabebomyces gen. nov.) on leaves of Vachellia erioloba, Preussia procaviae on dung of Procavia capensis . Pakistan , Russula shawarensis from soil on forest floor. Russia , Cyberlindnera dauci from Daucus carota . South Africa , Acremonium behniae on leaves of Behnia reticulata, Dothiora aloidendri and Hantamomyces aloidendri (incl. Hantamomyces gen. nov.) on leaves of Aloidendron dichotomum , Endoconidioma euphorbiae on leaves of Euphorbia mauritanica , Eucasphaeria proteae on leaves of Protea neriifolia , Exophiala mali from inner fruit tissue of Malus sp., Graminopassalora geissorhizae on leaves of Geissorhiza splendidissima , Neocamarosporium leipoldtiae on leaves of Leipoldtia schultzii , Neocladosporium osteospermi on leaf spots of Osteospermum moniliferum , Neometulocladosporiella seifertii on leaves

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: none
Teacher disagreement score0.445
Threshold uncertainty score0.792

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0030.003
Science and technology studies0.0010.000
Scholarly communication0.0020.002
Open science0.0010.002
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.4450.557

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.198
Teacher spread0.188 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations134
Published2020
Admission routes2
Has abstractyes

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