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Record W3118492239 · doi:10.1111/2041-210x.13548

Automated classification of avian vocal activity using acoustic indices in regional and heterogeneous datasets

2021· article· en· W3118492239 on OpenAlexafffundabout
Daniel A. Yip, C. Lisa Mahon, Alexander G. MacPhail, Erin M. Bayne

Bibliographic record

VenueMethods in Ecology and Evolution · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAnimal Vocal Communication and Behavior
Canadian institutionsYukon Department of EnvironmentUniversity of AlbertaEnvironment and Climate Change Canada
FundersEnvironment and Climate Change CanadaAlberta Biodiversity Monitoring Institute
KeywordsData collectionComputer scienceCluster analysisSample (material)Sample size determinationVariation (astronomy)Identification (biology)Scale (ratio)Data miningGeographyMachine learningEcologyStatisticsCartography

Abstract

fetched live from OpenAlex

Abstract Acoustic indices combined with clustering and classification approaches have been increasingly used to automate identification of the presence of vocalizing taxa or acoustic events of interest. While most studies using this approach standardize data collection and study design parameters at the project or study level, recent trends in ecological research are to investigate patterns at regional or continental scales. Large‐scale studies often require collaboration between research groups and integration of data from multiple sources to fulfil objectives, which can lead to variation in recording equipment and data collection protocols. Our objectives were to determine how analytical approaches and variation in data collection and processing that is typical of regional acoustic monitoring programmes influences accuracy when identifying vocal activity in breeding birds. We used data from three regional datasets in Northern Alberta, Northern British Columbia, and Southern and Central Yukon, Canada to investigate the effect of analytical framework, sample size, local species richness and data collection variables on classification accuracy. We found supervised classification approaches to be the most effective, with boosted regression trees identifying vocalizations of breeding birds in audio recordings with a 92.0% accuracy and easily able to accommodate variation in data collection and processing parameters. We also provide recommendations on effectively processing large and heterogeneous datasets including sufficient sample size, accommodating potentially confounding variables and selecting suitable model training data. The results presented in this study can help inform decisions in data collection, data processing, and study design and analysis, maximize performance and accuracy during analysis, and efficiently process large, heterogeneous acoustic datasets to answer questions at scales previously difficult to investigate.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.788
Threshold uncertainty score0.255

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.075
GPT teacher head0.413
Teacher spread0.338 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations19
Published2021
Admission routes3
Has abstractyes

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