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Record W3122200606 · doi:10.1038/s41398-020-01082-z

Synaptic processes and immune-related pathways implicated in Tourette syndrome

2021· article· en· W3122200606 on OpenAlexaff
Fotis Tsetsos, Dongmei Yu, Jae Hoon Sul, Cornelia Illmann, Sabrina M. Darrow, Matthew E. Hirschtritt, Kirsten Müller‐Vahl, Manfred Stuhrmann, Guy A. Rouleau, H.N. Aschauer, Monika Schlögelhofer, Paul Sandor, Cathy L. Barr, Marco A. Grados, Harvey S. Singer, Markus M. Nöthen, Johannes Hebebrand, Anke Hinney, Csaba Barta, Zsanett Tárnok, Péter Nagy, Christel Depienne, Andreas Hartmann, Cathy L. Budman, Renata Rizzo, Gholson J. Lyon, James R. Batterson, Daniëlle C. Cath, Irene A. Malaty, Michael S. Okun, Cheston M. Berlin, Douglas W. Woods, Joseph Jankovic, Mary M. Robertson, Donald L. Gilbert, Lawrence W. Brown, Andrea Dietrich, Pieter J. Hoekstra, Samuel Kuperman, Samuel H. Zinner, Michael Wagner, James A. Knowles, Nancy J. Cox, Benjamin M. Neale, Lea K. Davis, Giovanni Coppola, Jeremiah M. Scharf, Peristera Paschou, Yves Dion, Erica Greenberg, Alden Y. Huang, Roger Kurlan, James F. Leckman, Jan Smit, Harald Aschauer Harald Aschauer, Anastasios Konstantinidis, Tomasz Wolańczyk, Yulia Worbe, Keun‐Ah Cheon, Blanca García-Delgar, Dorothy E. Grice, Julie Hagstrøm, Tammy Hedderly, Isobel Heyman, Chaim Huyser, Young Key Kim, Young‐Shin Kim, Robert A. King, Yun‐Joo Koh, Sodahm Kook, Bennett Leventhal, Marcos Madruga‐Garrido, Pablo Mir, Ástrid Morer, Alexander Münchau, Kerstin Jessica Plessen, Veit Roessner, Eun‐Young Shin, Dong‐Ho Song, Jungeun Song, Barbara J. Coffey, Thomas Fernandez, Nelson B. Freimer, Gary A. Heiman, Lisa Osiecki, Jay A. Tischfield

Bibliographic record

VenueTranslational Psychiatry · 2021
Typearticle
Languageen
FieldPsychology
TopicObsessive-Compulsive Spectrum Disorders
Canadian institutionsHospital for Sick ChildrenSickKids FoundationUniversity of TorontoMontreal Neurological Institute and HospitalUniversity Health NetworkMcGill UniversityUniversité de MontréalMcGill University Health Centre
FundersEuropean Social FundEuropean CommissionEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentNational Institute on Minority Health and Health DisparitiesNational Human Genome Research InstituteNational Center for Advancing Translational SciencesNational Institute of Neurological Disorders and StrokeNational Institute of Nursing ResearchNational Institute on Deafness and Other Communication DisordersNational Institute of Mental HealthNational Institutes of HealthState Scholarships Foundation
KeywordsTourette syndromeNeuroscienceBiologyGenome-wide association studyGeneSignal transductionCell adhesion moleculeCell adhesionGene regulatory networkGeneticsGene expressionCellPsychologyGenotypePsychiatrySingle-nucleotide polymorphism

Abstract

fetched live from OpenAlex

Tourette syndrome (TS) is a neuropsychiatric disorder of complex genetic architecture involving multiple interacting genes. Here, we sought to elucidate the pathways that underlie the neurobiology of the disorder through genome-wide analysis. We analyzed genome-wide genotypic data of 3581 individuals with TS and 7682 ancestry-matched controls and investigated associations of TS with sets of genes that are expressed in particular cell types and operate in specific neuronal and glial functions. We employed a self-contained, set-based association method (SBA) as well as a competitive gene set method (MAGMA) using individual-level genotype data to perform a comprehensive investigation of the biological background of TS. Our SBA analysis identified three significant gene sets after Bonferroni correction, implicating ligand-gated ion channel signaling, lymphocytic, and cell adhesion and transsynaptic signaling processes. MAGMA analysis further supported the involvement of the cell adhesion and trans-synaptic signaling gene set. The lymphocytic gene set was driven by variants in FLT3, raising an intriguing hypothesis for the involvement of a neuroinflammatory element in TS pathogenesis. The indications of involvement of ligand-gated ion channel signaling reinforce the role of GABA in TS, while the association of cell adhesion and trans-synaptic signaling gene set provides additional support for the role of adhesion molecules in neuropsychiatric disorders. This study reinforces previous findings but also provides new insights into the neurobiology of TS.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.263
Teacher spread0.252 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations58
Published2021
Admission routes1
Has abstractyes

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