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Record W3122604077 · doi:10.1097/ee9.0000000000000129

Centralizing environmental datasets to support (inter)national chronic disease research

2021· article· en· W3122604077 on OpenAlexafffundabout
Jeffrey R. Brook, Dany Doiron, Eleanor Setton, Jeroen Lakerveld

Bibliographic record

VenueEnvironmental Epidemiology · 2021
Typearticle
Languageen
FieldEnvironmental Science
TopicHealth, Environment, Cognitive Aging
Canadian institutionsUniversity of VictoriaMcGill University Health CentreOccupational Cancer Research CentrePublic Health OntarioUniversity of Toronto
FundersCanadian Institutes of Health ResearchNederlandse Organisatie voor Wetenschappelijk OnderzoekZonMwAmsterdam University Medical Centers
KeywordsMetadataData scienceEnvironmental dataDocumentationComputer scienceExposomeHarmonizationEnvironmental epidemiologyLinkage (software)Big dataEnvironmental monitoringData miningEnvironmental healthWorld Wide WebEngineeringMedicine

Abstract

fetched live from OpenAlex

Whereas environmental data are increasingly available, it is often not clear how or if datasets are available for health research. Exposure metrics are typically developed for specific research initiatives using disparate exposure assessment methods and no mechanisms are put in place for centralizing, archiving, or distributing environmental datasets. In parallel, potentially vast amounts of environmental data are emerging due to new technologies such as high resolution imagery and machine learning. OBJECTIVES: The Canadian Urban Environmental Health Research Consortium (CANUE) and the Geoscience and Health Cohort Consortium (GECCO) provide a proof of concept that centralizing and disseminating environmental data for health research is valuable and can accelerate discovery. In this essay, we argue that more efficient use of exposure data for environmental epidemiological research over the next decade requires progress in four key areas: metadata and data access portals, linkage with health databases, harmonization of exposure measures and models over large areas, and leveraging "big data" streams for exposure characterization and evaluation of temporal changes. DISCUSSION: Optimizing the use of existing environmental data and exploiting emerging data streams can provide unprecedented research opportunities in environmental epidemiology through a better characterization of individuals' exposures and the ability to study the intersecting impacts of multiple environmental features or urban attributes across different populations around the world. Proper documentation, linkage, and dissemination of new and emerging exposure data leads to a better awareness of data availability, a reduction of duplication of effort and increases research output.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.005
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.368
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0050.001
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0010.003
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0510.029

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.123
GPT teacher head0.411
Teacher spread0.288 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2021
Admission routes3
Has abstractyes

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