MétaCan
Menu
Back to cohort
Record W3124804568 · doi:10.1080/23802359.2020.1862000

The complete mitochondrial genome of the Indian leafwing butterfly <i>Kallima paralekta</i> (insecta: Lepidoptera: Nymphalidae)

2021· article· en· W3124804568 on OpenAlexafffund
Cassidy P. Aguila, Ryan M. Aikens, Parneet K. Ateliey, Hannah M. Buhr, Michael G. Castro, Rayeil J. Chua, Nishtha Dayal, Heather N. Deane, Brendan Dennehy, Meerim Esenbekova, Jessica L. Fay, Carly Gair, Brady R. Gordon, Soomin Huh, Fariba Ishrar, Elizabeth B. Jonson, Charanpreet Kaur, Clémence Kokolo, K. Lanyon, David Laudato, Tri Le, McKay Lowry, Imane Marrakchi, Ruth Marte, Connor S. McIntyre, Jaime C. McNicholl, Gabrielle B. Nowlin, Claudia Pfeifer, Luc J. Posillipo, Shamsa Ricci, Sean M. Robertson, Jillian Roziere, Prerna Sharma, Danilo Shevkoplyas, Holly J. Stokes, Rebecca E. Twilley, Chenyi Wang, Jennifer K. Watt, Arizona G. Wilkinson, Jenelle M. Williams, Michael D. Wood, Heeeun Yang, Jeffrey M. Marcus

Bibliographic record

VenueMitochondrial DNA Part B · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicLepidoptera: Biology and Taxonomy
Canadian institutionsUniversity of Manitoba
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsNymphalidaeBiologyMonophylySister groupMitochondrial DNAPhylogenetic treeSubfamilyStart codonEvolutionary biologyLepidoptera genitaliaGeneticsGeneBotanyClade

Abstract

fetched live from OpenAlex

The Indian leafwing butterfly Kallima paralekta (Horsfield, 1829) (Nymphalidae) is an Asian forest-dwelling, leaf-mimic. Genome skimming by Illumina sequencing permitted assembly of a complete circular mitogenome of 15,200 bp from K. paralekta consisting of 79.5% AT nucleotides, 22 tRNAs, 13 protein-coding genes, two rRNAs and a control region in the typical butterfly gene order. Kallima paralekta COX1 features an atypical CGA start codon, while ATP6, COX1, COX2, ND4, ND4L, and ND5 exhibit incomplete stop codons completed by 3’ A residues added to the mRNA. Phylogenetic reconstruction places K. paraleckta within the monophyletic genus Kallima, sister to Mallika in the subfamily Nymphalinae. These data support the monophyly of tribe Kallimini and contribute to the evolutionary systematics of the Nymphalidae.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.221
Teacher spread0.205 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2021
Admission routes2
Has abstractyes

Explore more

Same venueMitochondrial DNA Part BSame topicLepidoptera: Biology and TaxonomyFrench-language works237,207