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Record W3125854049 · doi:10.1111/2041-210x.13556

Calibration chain transformation improves the comparability of organic hydrogen and oxygen stable isotope data

2021· article· en· W3125854049 on OpenAlexaff
Sarah Magozzi, Clément P. Bataille, Keith A. Hobson, Michael B. Wunder, John D. Howa, Andrea Contina, Hannah B. Vander Zanden, Gabriel J. Bowen

Bibliographic record

VenueMethods in Ecology and Evolution · 2021
Typearticle
Languageen
FieldEnvironmental Science
TopicIsotope Analysis in Ecology
Canadian institutionsEnvironment and Climate Change CanadaWestern UniversityUniversity of Ottawa
FundersNational Science Foundation
KeywordsComparabilityComputer scienceCalibrationTransformation (genetics)Data miningEnvironmental scienceStatisticsChemistryMathematics

Abstract

fetched live from OpenAlex

Abstract Stable hydrogen and oxygen isotopic compositions (δ 2 H and δ 18 O, respectively) of animal tissues have been used to infer geographical origin or mobility based on the premise that the isotopic composition of tissue is systematically related to that of local water sources. Isotopic data for known‐origin samples are required to quantify these tissue–environment relationships. Although many of such data have been published and could be reused by researchers, differences in the standards used for calibration and analytical procedures for different datasets limit the comparability of these data. We develop an algorithm that uses results from comparative analysis of secondary standards to transform data among reference scales and estimate the uncertainty inherent in these transformations. We apply the algorithm to a compilation of known‐origin keratin data published over the past ~20 years. We show that transformation improves the comparability of data from different laboratories, and that the transformed data suggest ecophysiologically meaningful differences in keratin–water relationships among different animal groups and taxa. The compiled data and algorithms are freely available in the ASSIGNR r ‐package to support geographical provenance research, and more generally offer a methodology overcoming several challenges in geochemical data integration and reuse.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.135
Threshold uncertainty score0.453

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0030.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.307
Teacher spread0.282 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations24
Published2021
Admission routes1
Has abstractyes

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