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Record W3126547178 · doi:10.1002/mp.14751

Dynamic PET image reconstruction utilizing intrinsic data‐driven HYPR4D denoising kernel

2021· article· en· W3126547178 on OpenAlexafffund
Ju‐Chieh Cheng, Connor Bevington, Arman Rahmim, Ivan S. Klyuzhin, Julian C. Matthews, Ronald Boellaard, Vesna Sossi

Bibliographic record

VenueMedical Physics · 2021
Typearticle
Languageen
FieldMedicine
TopicMedical Imaging Techniques and Applications
Canadian institutionsUniversity of British Columbia
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsKernel (algebra)Noise reductionComputer scienceArtificial intelligenceIterative reconstructionNoise (video)Imaging phantomComputer visionPattern recognition (psychology)Reconstruction filterFilter (signal processing)Image resolutionImage (mathematics)MathematicsFilter designNuclear medicine

Abstract

fetched live from OpenAlex

Purpose Reconstructed PET images are typically noisy, especially in dynamic imaging where the acquired data are divided into several short temporal frames. High noise in the reconstructed images translates to poor precision/reproducibility of image features. One important role of “denoising” is therefore to improve the precision of image features. However, typical denoising methods achieve noise reduction at the expense of accuracy. In this work, we present a novel four‐dimensional (4D) denoised image reconstruction framework, which we validate using 4D simulations, experimental phantom, and clinical patient data, to achieve 4D noise reduction while preserving spatiotemporal patterns/minimizing error introduced by denoising. Methods Our proposed 4D denoising operator/kernel is based on HighlY constrained backPRojection (HYPR), which is applied either after each update of OSEM reconstruction of dynamic 4D PET data or within the recently proposed kernelized reconstruction framework inspired by kernel methods in machine learning. Our HYPR4D kernel makes use of the spatiotemporal high frequency features extracted from a 4D composite, generated within the reconstruction, to preserve the spatiotemporal patterns and constrain the 4D noise increment of the image estimate. Results Results from simulations, experimental phantom, and patient data showed that the HYPR4D kernel with our proposed 4D composite outperformed other denoising methods, such as the standard OSEM with spatial filter, OSEM with 4D filter, and HYPR kernel method with the conventional 3D composite in conjunction with recently proposed High Temporal Resolution kernel (HYPRC3D‐HTR), in terms of 4D noise reduction while preserving the spatiotemporal patterns or 4D resolution within the 4D image estimate. Consequently, the error in outcome measures obtained from the HYPR4D method was less dependent on the region size, contrast, and uniformity/functional patterns within the target structures compared to the other methods. For outcome measures that depend on spatiotemporal tracer uptake patterns such as the nondisplaceable Binding Potential (BP ND ), the root mean squared error in regional mean of voxel BP ND values was reduced from ~8% (OSEM with spatial or 4D filter) to ~3% using HYPRC3D‐HTR and was further reduced to ~2% using our proposed HYPR4D method for relatively small target structures (~10 mm in diameter). At the voxel level, HYPR4D produced two to four times lower mean absolute error in BP ND relative to HYPRC3D‐HTR. Conclusion As compared to conventional methods, our proposed HYPR4D method can produce more robust and accurate image features without requiring any prior information.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Other design · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.930
Threshold uncertainty score0.594

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.338
Teacher spread0.303 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designOther design
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations23
Published2021
Admission routes2
Has abstractyes

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