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Record W3126652400 · doi:10.1038/s41598-021-82760-w

Assessing robustness of carotid artery CT angiography radiomics in the identification of culprit lesions in cerebrovascular events

2021· article· en· W3126652400 on OpenAlexaff
Elizabeth Le, Leonardo Rundo, Jason M. Tarkin, Nicholas R. Evans, Mohammed M. Chowdhury, Patrick A. Coughlin, Holly Pavey, C. Wall, Fulvio Zaccagna, Ferdia A. Gallagher, Yuan Huang, Rouchelle Sriranjan, Anthony Le, Jonathan Weir‐McCall, Michael Roberts, Fiona J. Gilbert, Elizabeth A. Warburton, Carola‐Bibiane Schönlieb, Evis Sala, James H.F. Rudd

Bibliographic record

VenueScientific Reports · 2021
Typearticle
Languageen
FieldMedicine
TopicRadiomics and Machine Learning in Medical Imaging
Canadian institutionsUniversity of Toronto
FundersNIHR Imperial Biomedical Research CentreHorizon 2020Medical Research CouncilNIHR Cambridge Biomedical Research CentreEuropean CommissionSchool of Clinical Medicine, University of CambridgeWellcome TrustRoyal College of Surgeons of EnglandDunhill Medical TrustDepartment of Health and Social CareLeverhulme TrustNational Institute for Health and Care ResearchMark Foundation For Cancer ResearchHigher Education Funding Council for EnglandAlan Turing InstituteUniversity of CambridgeCancer Research UKBritish Heart FoundationEngineering and Physical Sciences Research CouncilAstraZeneca
KeywordsRadiomicsMedicineRobustness (evolution)RadiologyArtificial intelligenceCulpritCarotid artery diseaseSegmentationComputed tomography angiographyFeature extractionAngiographyFeature (linguistics)Pattern recognition (psychology)Computer scienceCarotid endarterectomyInternal medicine

Abstract

fetched live from OpenAlex

Radiomics, quantitative feature extraction from radiological images, can improve disease diagnosis and prognostication. However, radiomic features are susceptible to image acquisition and segmentation variability. Ideally, only features robust to these variations would be incorporated into predictive models, for good generalisability. We extracted 93 radiomic features from carotid artery computed tomography angiograms of 41 patients with cerebrovascular events. We tested feature robustness to region-of-interest perturbations, image pre-processing settings and quantisation methods using both single- and multi-slice approaches. We assessed the ability of the most robust features to identify culprit and non-culprit arteries using several machine learning algorithms and report the average area under the curve (AUC) from five-fold cross validation. Multi-slice features were superior to single for producing robust radiomic features (67 vs. 61). The optimal image quantisation method used bin widths of 25 or 30. Incorporating our top 10 non-redundant robust radiomics features into ElasticNet achieved an AUC of 0.73 and accuracy of 69% (compared to carotid calcification alone [AUC: 0.44, accuracy: 46%]). Our results provide key information for introducing carotid CT radiomics into clinical practice. If validated prospectively, our robust carotid radiomic set could improve stroke prediction and target therapies to those at highest risk.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.005
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.105
Threshold uncertainty score0.334

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0050.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.002
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.300
Teacher spread0.283 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations50
Published2021
Admission routes1
Has abstractyes

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