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Record W3126725312 · doi:10.3390/rs13030524

Earth Observation-Informed Risk Maps of the Lyme Disease Vector Ixodes scapularis in Central and Eastern Canada

2021· article· en· W3126725312 on OpenAlexaffabout
Serge Olivier Kotchi, Catherine Bouchard, Stéphanie Brazeau, Nicholas H. Ogden

Bibliographic record

VenueRemote Sensing · 2021
Typearticle
Languageen
FieldImmunology and Microbiology
TopicVector-borne infectious diseases
Canadian institutionsUniversité de MontréalPublic Health Agency of Canada
Fundersnot available
KeywordsIxodes scapularisLyme diseaseTickPopulationGeographyAmazonianVeterinary medicineForestryBiologyDemographyEcologyMedicineIxodidaeVirologyAmazon rainforest

Abstract

fetched live from OpenAlex

Climate change is facilitating the geographic range expansion of populations of the tick vector of Lyme disease Ixodes scapularis in Canada. Here, we characterize and map the spatio-temporal variability of environments suitable for I. scapularis using Earth observation (EO) data. A simple algorithm for I. scapularis occurrence (cumulative degree-days and forest: CSDF) was developed by combining cumulative annual surface degree-days above 0 °C and forest cover. To map the environmental risk of I. scapularis (risk of I. scapularis: RIS) in central and eastern Canada from 2000 to 2015, CSDF was adjusted using data from an I. scapularis population model. CSDF was validated using cumulative annual degree days >0 °C (CADD) from meteorological stations, and CSDF was strongly associated with CADD (n = 52, R2 > 0.86, p < 0.001). Data on field surveillance for I. scapularis ticks (2008 to 2018) were used to validate the risk maps. The presence of I. scapularis ticks was significantly associated with CSDF, and at a limit of 2800, sensitivity approached 100%. RIS increased over the study period, with the highest values in 2012 and the lowest in 2000. The RIS was on average higher in Ontario and Quebec compared to other provinces, and it was higher in the southern parts of the provinces. The proportion of the populated areas with a positive RIS increased on average in central and eastern Canada from 2000 to 2015. Predicted I. scapularis occurrence identifies areas with a more probable risk of tick bites, Lyme disease, and other I. scapularis-borne diseases, which can help guide targeted surveillance, prevention, and control interventions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.350
Threshold uncertainty score0.787

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.205
Teacher spread0.195 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations27
Published2021
Admission routes2
Has abstractyes

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