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Record W3127124512 · doi:10.21203/rs.3.rs-135072/v1

Rapid Antibiotic Susceptibility Testing on Pathogenic Bacteria in Solid Growth Medium Using a Real-Time and Contactless Planar Microwave Resonator Sensor

2021· preprint· en· W3127124512 on OpenAlexafffund
Mandeep Chhajer Jain, Anupama Pillai, Rakesh Narang, Mohammad H. Zarifi

Bibliographic record

VenueResearch Square · 2021
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBacterial Identification and Susceptibility Testing
Canadian institutionsUniversity of British Columbia
FundersNatural Sciences and Engineering Research Council of CanadaMinistère de la Défense NationaleCMC Microsystems
KeywordsResonatorMicrowaveBacteriaAntibioticsErythromycinDielectricAgarMaterials scienceBacterial growthMicrobiologyPathogenic bacteriaOptoelectronicsBiologyComputer scienceTelecommunications

Abstract

fetched live from OpenAlex

Abstract Infection diagnosis and antibiotic susceptibility testing (AST) are pertinent clinical microbiology practices that are in dire need of improvement, as current standards are not able to keep up with the mutations and resistance development of certain bacterial strains. This paper presents a novel way to conduct AST which hybridizes disk diffusion AST with microwave resonators for rapid, contactless, non-invasive and high-throughput testing. This work uses Escherichia coli ( E. coli ) cultured on solid agar and places bacteria samples on a microwave split-ring resonator along with antibiotic disks (erythromycin) of various doses to demonstrate the viability of this sensing method in a clinical microbiological setting. The microwave resonator, operating at a 1.76 GHz resonant frequency, boasted a 5 mm2 sensitive sensing region. A one-port sensor was designed and optimized for detecting dielectric property variations of lossy dielectric materials accurately. This sensor was calibrated to detect uninhibited growth of the bacteria at 0.005 dB/hr, with a maximum change of 0.07 dB over the course of 15 hrs. The transient resonant amplitude change was subsequently dampened for each increasing dosage of antibiotic tested, with 45 µg of erythromycin showing negligible change indicating complete inhibited growth. This AST sensor demonstrated decisive results of antibiotic susceptibility in under 6 hours and shows great promise to further automate the intricate workflow of AST in clinical settings, while providing rapid, sensitive, non-invasive and high-throughput detection capabilities.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.005
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.464
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0030.005
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.071
GPT teacher head0.352
Teacher spread0.281 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes2
Has abstractyes

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