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Record W3128966077 · doi:10.3390/iecps2020-08887

Mutation of MsSPL8 Alleles via CRISPR/Cas9-Mediated Genome Editing Leads to Superior Abiotic Stress Resiliency and Distinct Morphological Alterations in Alfalfa

2020· article· en· W3128966077 on OpenAlexaff
Stacy D. Singer, Kimberley Burton Hughes, Gaganpreet Kaur Dhariwal, Udaya Subedi, Kazi A. Kader, Abdelali Hannoufa, S. N. Acharya

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCRISPR and Genetic Engineering
Canadian institutionsUniversity of AlbertaAgriculture and Agri-Food Canada
Fundersnot available
KeywordsBiologyGenome editingCRISPRAbiotic stressCas9BiotechnologyGermplasmAbiotic componentAgronomyCropGenetically modified cropsTransgeneGeneticsGeneEcology

Abstract

fetched live from OpenAlex

Increase in demand for meat, milk and their products is expected to escalate considerably in coming years due to our ever-expanding population. While increases in forage crop production will therefore be a necessity to meet demand, our ability to attain high levels of forage crop productivity is likely to be constrained by typical environmental pressures such as drought and salinity due to climate change. Alfalfa (Medicago sativa L.) is one of the world’s most widely grown forage species, with a cropping area of over 30 million hectares worldwide. As such, there is a critical need to exploit advanced molecular breeding technologies in this species with the aim of rapidly developing alfalfa cultivars with improved biomass, as well as resiliency to various types of abiotic stress. It has been shown previously that the RNAi-mediated down-regulation of the miRNA156 target gene, SQUAMOSA PROMOTER BINDING PROTEIN-LIKE8 (MsSPL8), enhances biomass production, as well as drought and salinity tolerance, in alfalfa. However, due to negative public perception and regulatory constraints surrounding the use of transgenic crops, it remains a challenge to implement such a crop in growers’ fields. CRISPR/Cas9-based genome editing provides an alternative breeding tool that yields germplasm bearing a mutation that is fundamentally identical to those achieved using conventional breeding approaches such as chemical mutagenesis, and the resulting plants can be made transgene-free in a straightforward manner. In this study, we successfully targeted MsSPL8 alleles using this technology in alfalfa, and isolated genotypes with mutations in approximately 25%, 50% and 75% of MsSPL8 alleles, respectively, in this tetraploid species. Furthermore, enhanced drought and salinity resistance, along with distinct morphological alterations including early flowering and reductions in internode length, were noted in the first generation of edited genotypes, which suggests that CRISPR/Cas9 can provide an effective breeding tool in alfalfa.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.274
Teacher spread0.264 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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