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Record W3134982649 · doi:10.3390/microorganisms9030498

Characterization of Ebola Virus Risk to Bedside Providers in an Intensive Care Environment

2021· article· en· W3134982649 on OpenAlexafffund
Mia J. Biondi, Lauren Garnett, Alexander Bello, Duane J. Funk, Philippe Guillaume Poliquin, Shane Jones, Kevin Tierney, Kaylie N. Tran, Robert Kozak, Anders Leung, Allen Grolla, Cory Nakamura, Geoff Soule, Charlene Ranadheera, Mable Chan, A. Dhaliwal, Darwyn Kobasa, Darryl Falzarano, Hugues Fausther Bovendo, Heinz Feldmann, Murray Kesselman, Gregory Hansen, Jason Gren, Todd Mortimer, Trina Racine, Yvon Deschambault, Jocelyn Edmonds, Sam Aminian, Ray Saurette, M. F. Allan, Lauren Rondeau, John Huynh, Sharron Hadder, Christy Press, Christine DeGraff, Stephanie Kucas, Julie Kubay, Kim Azanarsky, Bradley W. M. Cook, BJ Hancock, Anand Kumar, Reeni Soni, Daryl Schantz, Jarrid McKitrick, Bryce M. Warner, Bryan D. Griffin, Xiangguo Qiu, Gary Kobinger, Dave Safronetz, Heidi Wood, Derek R. Stein, Todd Cutts, Bradley Pickering, James F. Kenny, Steven Theriault, Liam Menec, Robert Vendramelli, Sean Higgins, Logan Banadyga, Guodong Liu, Samantha Kasloff, Angela Sloan, Shihua He, Nikesh Tailor, Alixandra Albietz, Gary Wong, Michael J. Gray, Friederike Feldmann, Andrea Marzi, George Risi, James E. Strong

Bibliographic record

VenueMicroorganisms · 2021
Typearticle
Languageen
FieldMedicine
TopicViral Infections and Outbreaks Research
Canadian institutionsUniversité LavalUniversity of SaskatchewanMedtronic (Canada)University Health NetworkUniversity of TorontoCentre hospitalier universitaire de QuébecUniversity of ManitobaRoyal University HospitalPublic Health Agency of CanadaCanadian Food Inspection Agency
FundersCanadian Institutes of Health Research
KeywordsEbola virusMedicineBiosafetyHygieneIntensive care unitOutbreakIntensive care medicineIntensive carePersonal protective equipmentDiseaseHealth careEmergency medicineInfection controlMedical emergencyInfectious disease (medical specialty)VirologyCoronavirus disease 2019 (COVID-19)Pathology

Abstract

fetched live from OpenAlex

BACKGROUND: The 2014-2016 Ebola outbreak in West Africa recapitulated that nosocomial spread of Ebola virus could occur and that health care workers were at particular risk including notable cases in Europe and North America. These instances highlighted the need for centers to better prepare for potential Ebola virus cases; including understanding how the virus spreads and which interventions pose the greatest risk. METHODS: We created a fully equipped intensive care unit (ICU), within a Biosafety Level 4 (BSL4) laboratory, and infected multiple sedated non-human primates (NHPs) with Ebola virus. While providing bedside care, we sampled blood, urine, and gastric residuals; as well as buccal, ocular, nasal, rectal, and skin swabs, to assess the risks associated with routine care. We also assessed the physical environment at end-point. RESULTS: Although viral RNA was detectable in blood as early as three days post-infection, it was not detectable in the urine, gastric fluid, or swabs until late-stage disease. While droplet spread and fomite contamination were present on a few of the surfaces that were routinely touched while providing care in the ICU for the infected animal, these may have been abrogated through good routine hygiene practices. CONCLUSIONS: Overall this study has helped further our understanding of which procedures may pose the highest risk to healthcare providers and provides temporal evidence of this over the clinical course of disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.112
Threshold uncertainty score0.363

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.279
Teacher spread0.266 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2021
Admission routes2
Has abstractyes

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