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Record W3135611966 · doi:10.1139/cjb-2020-0187

Fungal symbionts of endangered <i>Crocanthemum canadense</i> (Cistaceae) in Nova Scotia

2021· article· en· W3135611966 on OpenAlexafffundvenueabout
P. Byers, Rodger C. Evans, Zoë Migicovsky, Alison Walker

Bibliographic record

VenueBotany · 2021
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicMycorrhizal Fungi and Plant Interactions
Canadian institutionsDalhousie UniversityAcadia University
FundersDalhousie UniversityAcadia UniversityMcGill University
KeywordsBiologyRhizosphereBotanyEndangered speciesNova scotiaInternal transcribed spacerChytridiomycotaEcologyHabitatGeographyAscomycotaPhylogenetic treeArchaeology

Abstract

fetched live from OpenAlex

Crocanthemum canadense (L.) Britton (Cistaceae) is critically imperiled in Nova Scotia. The decline of Nova Scotian Crocanthemum canadense is largely due to the loss of the Annapolis Valley sand barrens habitat. Fungal symbionts may aid in nutrient and water acquisition as well as plant defenses. The role of fungal associations with Crocanthemum canadense is unknown; our goal was to identify fungal symbionts to inform ongoing conservation research. We isolated fungi from eighteen Crocanthemum canadense plants collected from Greenwood, Nova Scotia. Using internal transcribed spacer (ITS) rDNA barcoding of fungal cultures, we identified 58 fungal taxa. ITS2 meta-amplicon barcoding of roots and rhizosphere soil revealed 241 fungi with basidiomycetes accounting for 53.8% of reads. Chaetothyriales sp., Mycetinis scorodonius, Acidomelania panicicola, and Scleroderma citrinum were the most abundant root associates based on meta-amplicon data. We quantified percent root colonization of arbuscular mycorrhizal fungi (AMF) using root staining and microscopy. The average AMF colonization rate of the roots was 29.6% (n = 18). Our research provides a foundation for understanding the fungal community in this declining habitat and the first account of fungal symbionts in the above- and below-ground tissues and rhizosphere of Crocanthemum canadense. Identifying fungi influencing endangered Nova Scotian Crocanthemum canadense is valuable for developing conservation strategies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.377
Threshold uncertainty score0.758

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.214
Teacher spread0.200 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2021
Admission routes4
Has abstractyes

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