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Record W3139133216 · doi:10.1002/trc2.12147

Multilingual automation of transcript preprocessing in Alzheimer's disease detection

2021· article· en· W3139133216 on OpenAlexaff
Frédéric Abiven, Sylvie Ratté

Bibliographic record

VenueAlzheimer s & Dementia Translational Research & Clinical Interventions · 2021
Typearticle
Languageen
FieldComputer Science
TopicSpeech Recognition and Synthesis
Canadian institutionsÉcole de Technologie Supérieure
Fundersnot available
KeywordsPreprocessorComputer sciencePipeline (software)Natural language processingNormalization (sociology)ScalabilityTask (project management)Context (archaeology)Data pre-processingInformation extractionArtificial intelligenceMachine learningProgramming languageBiologyDatabase

Abstract

fetched live from OpenAlex

INTRODUCTION: Analyzing linguistic functions can improve early detection of Alzheimer's disease (AD). To date, no studies have focused on creating a universal pipeline for clinical transcript preprocessing. METHODS: This article presents a simple and efficient method for processing linguistic and phonetic data, sequencing subproblems of cleaning, normalization, and measure extraction tasks. Because some of these tasks are language- and context- dependent, they were designed to be easily configurable, thus increasing their scalability when dealing with new corpora. RESULTS: Results show improved performances over previous studies in this time-consuming preprocessing task. Moreover, our findings showed that some discursive markers extracted from transcripts revealed a significant correlation (>0.5) with cognitive impairment severity. DISCUSSION: This article contributes to the literature on AD by presenting an efficient pipeline that allows speeding up the transcripts preprocessing task. We further invite other researchers to contribute to this work to help improve the quality of this pipeline (https://github.com/LiNCS-lab/usAge).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.005
metaresearch head score (Gemma)0.014
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.020
Threshold uncertainty score0.067

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0050.014
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0030.002
Science and technology studies0.0010.001
Scholarly communication0.0020.002
Open science0.0010.004
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0200.023

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.349
GPT teacher head0.496
Teacher spread0.147 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2021
Admission routes1
Has abstractyes

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