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Record W3139317540 · doi:10.1002/mrm.28734

Efficient whole‐brain tract‐specific T<sub>1</sub> mapping at 3T with slice‐shuffled inversion‐recovery diffusion‐weighted imaging

2021· article· en· W3139317540 on OpenAlexafffund
Ilana R. Leppert, Daniel Andrews, Jennifer S. W. Campbell, Daniel Park, G. Bruce Pike, Jon̈athan R. Polimeni, Christine Tardif

Bibliographic record

VenueMagnetic Resonance in Medicine · 2021
Typearticle
Languageen
FieldMedicine
TopicAdvanced Neuroimaging Techniques and Applications
Canadian institutionsUniversity of CalgaryHotchkiss Brain InstituteMcGill UniversityMontreal Neurological Institute and Hospital
FundersNational Institute of Biomedical Imaging and BioengineeringNational Institute of Mental HealthFonds de Recherche du Québec - SantéNatural Sciences and Engineering Research Council of CanadaFonds de recherche du Québec – Nature et technologiesRéseau en Bio-Imagerie du Quebec
KeywordsDiffusion MRIVoxelCorticospinal tractImaging phantomWhite matterCorpus callosumCingulum (brain)PhysicsNuclear magnetic resonanceComputer scienceNuclear medicineArtificial intelligenceMagnetic resonance imagingAnatomyFractional anisotropyBiologyOpticsMedicineRadiology

Abstract

fetched live from OpenAlex

Purpose Most voxels in white matter contain multiple fiber populations with different orientations and levels of myelination. Conventional T1 mapping measures 1 T1 value per voxel, representing a weighted average of the multiple tract T1 times. Inversion‐recovery diffusion‐weighted imaging (IR‐DWI) allows the T1 times of multiple tracts in a voxel to be disentangled, but the scan time is prohibitively long. Recently, slice‐shuffled IR‐DWI implementations have been proposed to significantly reduce scan time. In this work, we demonstrate that we can measure tract‐specific T1 values in the whole brain using simultaneous multi‐slice slice‐shuffled IR‐DWI at 3T. Methods We perform simulations to evaluate the accuracy and precision of our crossing fiber IR‐DWI signal model for various fiber parameters. The proposed sequence and signal model are tested in a phantom consisting of crossing asparagus pieces doped with gadolinium to vary T1, and in 2 human subjects. Results Our simulations show that tract‐specific T1 times can be estimated within 5% of the nominal fiber T1 values. Tract‐specific T1 values were resolved in subvoxel 2 fiber crossings in the asparagus phantom. Tract‐specific T1 times were resolved in 2 different tract crossings in the human brain where myelination differences have previously been reported; the crossing of the cingulum and genu of the corpus callosum and the crossing of the corticospinal tract and pontine fibers. Conclusion Whole‐brain tract‐specific T1 mapping is feasible using slice‐shuffled IR‐DWI at 3T. This technique has the potential to improve the microstructural characterization of specific tracts implicated in neurodevelopment, aging, and demyelinating disorders.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.005
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.273
Teacher spread0.248 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations15
Published2021
Admission routes2
Has abstractyes

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