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Record W3145955739

基于RNA-Seq技术的“紫娟”茶树转录组分析

2015· article· zh· W3145955739 on OpenAlexvenueno aff
陈林波, 夏丽飞, 周萌, 宋维希, 李晓霞, 焉文光, 梁名志

Bibliographic record

Venue分子植物育种 · 2015
Typearticle
Languagezh
FieldPharmacology, Toxicology and Pharmaceutics
TopicMedicinal Plant Pharmacodynamics Research
Canadian institutionsnot available
Fundersnot available
KeywordsRNA-SeqComputer scienceTranscriptomeBiologyGeneticsGeneGene expression
DOInot available

Abstract

fetched live from OpenAlex

本研究基于RNA-seq技术对紫娟茶树芽、第二叶、开面叶、成熟叶四个时期的转录组进行测序以及生物信息学相关分析。研究结果表明,经组装分析获得268 172条transcript,进一步处理transcript获得206 210条Unigene,将获得的Unigene与Nr、SWISS-PROT、Tr EMBL、Cdd、pfam和KOG库进行blast,有19 379个Unigene被注释上25种KOG分类,注释到KEGG的Unigene个数为13 608,涉及的pathway有302个。SSR查找发现,从268 172个transcript中找到35 509个SSR位点。研究结果可为研究紫娟茶树叶片在不同生长期的差异基因表达和开发紫色基因的分子标记奠定基础。

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Research integrity, Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.852
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0070.001
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0020.001
Research integrity0.0010.005
Insufficient payload (model declined to judge)0.0090.016

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.389
GPT teacher head0.542
Teacher spread0.153 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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