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Record W3150368436 · doi:10.13271/j.mpb.013.001017

彩色马铃薯类黄酮-3-O-葡萄糖基转移酶基因(3GT)的生物信息学和表达分析

2015· article· zh· W3150368436 on OpenAlexvenueno aff
肖继坪, 李 俊, 郭华春

Bibliographic record

Venue分子植物育种 · 2015
Typearticle
Languagezh
FieldBiochemistry, Genetics and Molecular Biology
TopicPhotosynthetic Processes and Mechanisms
Canadian institutionsnot available
Fundersnot available
KeywordsGeology

Abstract

fetched live from OpenAlex

类黄酮-3-O-葡萄糖基转移酶(3GT)能催化无色的花色素生成有色的花色苷。本研究采用RT-PCR法从彩色马铃薯中克隆了3GT基因,并对其进行了生物信息学分析和组织表达模式分析。结果显示,3GT基因编码448个氨基酸残基,具有信号肽但无跨膜结构域,还有一定的亲水性,定位于细胞质。同源比对表明3GT与茄子等茄科植物同属一簇,亲缘关系最近,与玉米等单子叶植物亲缘关系较远。3GT蛋白主要的二级结构元件为α-螺旋和无规则卷曲,且只有一个功能结构域,即氨基酸序列中的93~407区段,它与UDP-glucoronosyl、UDP-glucosyl transferase的功能结构域相匹配,因此,3GT属于UDPGT型糖基转移酶超家族的一员。组织特异性表达结果表明:3GT相对表达量和花色苷含量均是块茎高于叶片,它们的变化趋势基本一致,花色苷含量较高的器官,其3GT的相对表达量也较高,说明花色苷的积累与3GT的表达正相关。本研究可为花色苷积累的生化及分子机制研究奠定基础,并为进一步研究该基因在花色苷合成途径中的调控功能提供理论依据。

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.023

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.002
Science and technology studies0.0010.001
Scholarly communication0.0030.003
Open science0.0010.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0070.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.258
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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