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Record W3161789398 · doi:10.1093/mollus/eyab010

A new species of <i>Sakuraeolis</i> from Mozambique, described using 3D reconstruction of anatomy and phylogenetic analysis

2021· article· en· W3161789398 on OpenAlexfundno aff
Dawn C Ellis-Diamond, Bernard Picton, Yara Tibiriçá, Julia D. Sigwart

Bibliographic record

VenueJournal of Molluscan Studies · 2021
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicMarine Biology and Ecology Research
Canadian institutionsnot available
FundersQueen's University
KeywordsBiologyParaphylyPhylogenetic treeZoologyCladeNudibranchMolecular phylogeneticsPhylogeneticsGenusCytochrome c oxidase subunit IEvolutionary biologyGastropodaGeneticsGene

Abstract

fetched live from OpenAlex

ABSTRACT Here we describe a new species of shallow-subtidal nudibranch from south-eastern Africa. The strikingly vivid orange sea slug with white markings belongs to the long-disputed family Facelinidae, and has been photographed and recorded in the region by divers for some time. Tomographic modelling was applied to produce a 3D anatomical reconstruction of the reproductive and digestive organs from serial sections. A molecular phylogeny using multiple markers (cytochrome c oxidase subunit I, 16S rRNA and histone H3) recovered three distinct clades within the paraphyletic Facelinidae, in agreement with other recent studies. This topology supported a genus-level clade, including the type species of Sakuraeolis Baba, 1965, S. enosimensis Baba, 1930, the new species described herein, S. arcana n. sp., and an undescribed sibling species that shares morphological resemblance to S. arcana n. sp. Facelina quatrefagesi Vayssière, 1888 is also recognized as Caloria quatrefagesi n. comb. on the basis of molecular and morphology affinity. Field observations provided insight into phenology, with a population decline noted in August. Although the new species does not have the penial structure previously considered diagnostic for Sakuraeolis, the decision was made on the balance of evidence for phylogenetic affinity to amend the diagnosis of the genus to accommodate S. arcana n. sp.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.012
Threshold uncertainty score0.023

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.045
GPT teacher head0.285
Teacher spread0.240 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2021
Admission routes1
Has abstractyes

Explore more

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