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Glycomic Profiling Unveils Association Between Serum Glycosylation and Antibody Responses to Influenza Vaccines

2021· article· en· W3166480704 on OpenAlexaff
Rui Qin, Guanmin Meng, Ted M. Ross, Lara K. Mahal

Bibliographic record

VenueThe FASEB Journal · 2021
Typearticle
Languageen
FieldMedicine
TopicInfluenza Virus Research Studies
Canadian institutionsUniversity of Alberta
FundersNational Institute of Allergy and Infectious DiseasesNational Institutes of HealthU.S. Department of Health and Human Services
KeywordsVaccinationImmunologyAntibodyGlycanGlycosylationImmune systemInfluenza vaccineInnate immune systemImmunosenescenceVirologyBiologyPopulationMedicineGlycoproteinGenetics

Abstract

fetched live from OpenAlex

Despite being the most powerful approach to tackle influenza infections, current influenza vaccines have a mixed record of protection across the population. In the 2019‐2020 flu season, flu vaccines in the U.S. were ~ 40% effective. High‐risk populations, such as the obese and elderly, tend to have weaker responses to influenza vaccines, the molecular mechanisms behind which remain poorly understood. Glycans play critical roles in the human immune system. In this study, we examined serum glycosylation of 160 Caucasian adults pre‐ and post‐vaccination with the 2019 Fluzone® Quadrivalent Vaccine using an expanded version of our lectin microarray technology that included antibodies against innate immune lectins and select sera glycoproteins. Glycosylation profiles were examined in light of post‐vaccination antibody responses. Results showed that obese participants who exhibited poor antibody responses (non‐responders) to the vaccines had higher levels of pre‐vaccination innate immune lectins and high mannose glycans, suggesting a potential role of pre‐existing, lectin‐mediated immunity in the determination of vaccination outcomes. We observed widespread shifts in glycosylation in all participants associated with vaccination, possibly a result of antibody production. Non‐responders and responders showed strikingly similar degrees of glycosylation changes. However, we observed higher levels of β1,6‐branched N‐glycans in responders, indicating a correlation of this specific glycan epitope with effective antibody responses. Our findings reveal the association of serum glycosylation with antibody responses to vaccination for influenza and may point to new directions in the development of better vaccines.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.073
GPT teacher head0.399
Teacher spread0.326 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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