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Manipulation of smooth muscle BK <sub>Ca</sub> using subunit directed siRNA

2010· article· en· W3167399374 on OpenAlexaff
Yan Yang, Srikanth R. Ella, Andrew P. Braun, Ronald J. Korthuis, Michael J. Davis, Michael A. Hill

Bibliographic record

VenueThe FASEB Journal · 2010
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicIon channel regulation and function
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsProtein subunitTransfectionGene knockdownVascular smooth muscleSmall interfering RNAChemistryCell biologyMolecular biologyBiophysicsBiologyEndocrinologyBiochemistrySmooth muscleGene

Abstract

fetched live from OpenAlex

Cremaster and cerebral vascular smooth muscle cells (VSMC) exhibit heterogeneity in large conductance Ca 2+ ‐activated K + channels (BK Ca ) partly due to differences in β1:α subunit ratio. To gain insight into BK Ca methods were developed for subunit‐specific knockdown of the channel. Using transient transfection approaches and small interfering RNAs (siRNA) either the α or β1 subunit was targeted in isolated arterioles. Control studies used fluorescently labeled siRNA or unrelated siRNA. After 2–3 days culture fluorescence images and whole cell K + currents were examined in dispersed VSMC. From functional data α‐subunit expression was reduced by ~60% in both vessels. Thus, at +70 mV, IBTX‐sensitive K + current density was significantly reduced after α‐subunit siRNA compared to control. Similarly, STOC frequency (at +20 mV) decreased following siRNA treatment while BK Ca opening by NS1619 or estrogen (E2) was decreased. Cells treated with β1‐subunit siRNA showed impaired responses to E2 with a greater effect in cerebral VSMCs compared to those of cremaster. Thus transient transfection and siRNA can be used to effectively decrease endogenous BK Ca activity in intact small arteries. Further, cerebral VSMCs treated with β1‐subunit siRNA exhibit a functional phenotype similar to untreated cremaster VSMCs, supporting the idea that differences in β1:α subunit ratio underlie observed heterogeneity in BK Ca activity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.243
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2010
Admission routes1
Has abstractyes

Explore more

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